NONHSAT101868
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101868 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
615 nt |
Genomic location |
chr5-:68040965..68042203 |
Exon number |
2 |
Exons |
68040965..68041358,68041983..68042203 |
Genome context |
|
Sequence |
000001 GCCTAAATAA GGATTTGTTC AACGGACCAT AACCATTCAT GGCTCAAAGA GGGTTATACT ACTTTTGTGC CTGGAAACGT 000080
000081 TTCTAGCAAA GTCTTCATTT CCTGGACCAA AGGATGTGTG ATTTATGCGA AGATCTGCCC TCCTGTTGCC TCATGGGCTG 000160 000161 GGACCTTTGG AGAGACTCTT TGTGTATTCT CAAGAAAGGC TTAGTATTTA GAAGGTGCTC CACTCCTTTT CTGAGAAGAC 000240 000241 TCTTTCCCTG ATTCTCTTCC AAAGCCCTGA TTAGAATGAA ACTAACATCT ATTTGAAAAG GTAATCATTC TCACTCAGAT 000320 000321 GAGTTCTGCT CTGAAAGTGA GAGGAAAAAA AATCCAGAAT TGGGGCACtg ctatagactg aatgtttatg tctccttcaa 000400 000401 atcagatgtt gaaacctaat ccccagtgta agggtatttg gaggtgaggc ctttgggagg tgattaggtc acgagggtgg 000480 000481 agccctcagg aataagatta atgcccttag aaaagagacc ctagagaggt cgcttaccca ttctgccata gcaaagggac 000560 000561 tgctgcctta tgaacaggaa gtgtgctgtc cccagaaacc aagattagtg ccttg |
Predicted Small Protein
Name | NONHSAT101868_smProtein_113:250 |
Length | 46 |
Molecular weight | 5338.4336 |
Aromaticity | 0.111111111111 |
Instability index | 89.5111111111 |
Isoelectric point | 8.30474853516 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0384712443537 |
Amino acid sequence | MCDLCEDLPSCCLMGWDLWRDSLCILKKGLVFRRCSTPFLRRLFP |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHHHHHLLLEEEELLLHHHHHLLL |
PRMN | - |
PiMo | - |