NONHSAT101966
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101966 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
584 nt |
Genomic location |
chr5-:69493082..69503572 |
Exon number |
4 |
Exons |
69493082..69493217,69497695..69497869,69499708..69499792,69503385..69503572 |
Genome context |
|
Sequence |
000001 GGCTGGTGAA TTACCAGATC TCCGTCAAGT GCAGTAACCA GTTCAAGTTG GAAGTGTGTC TTTTGAATGC AGAAAACAAA 000080
000081 GTCGTGGACA ACCAGGCTGG GACCCAGGGC CAGCTGAAGG TGCTGGGTGC CAACCTCTGG TGGCCGTACC TGATGCACGA 000160 000161 ACACCCCGCC TACCTGTACT CGTGGGAGGA TGGTGATTGC TCACACCAAA GCCTTGGACC CCTCCCAGCC TGTGACCTTT 000240 000241 GTGACCAACT CCACCTACGC AGCAGACAAG GGGGCTCTGT ATGTGGATGT GATCCGTGTG AACAGCTACT ACTCTTGGTA 000320 000321 TCGCAACTAC GGGCACCTGG AGTTGATTCA GCTGCAGCTG GCCGCCCAGT TTGAGAATTG GTGTAAGACA TCACAATCCC 000400 000401 ATTATTCAGA GCGCGTATGG AGTGGAAACG CTTGTAGGGC TTCACCAGGA TCCACCTCTG ATGTTCAGTG AAGAGGACCG 000480 000481 GAAAAGTCTG CTAGAGCAGT ACCATCTGGG TCTGGATCAA AAACGCAGAA AATACGTGGT TGGAGAGCTC ATCTGGAATT 000560 000561 TTGCCGATTT CATGACTAAC CAGT |
Predicted Small Protein
Name | NONHSAT101966_smProtein_152:373 |
Length | 74 |
Molecular weight | 7831.7538 |
Aromaticity | 0.041095890411 |
Instability index | 77.7904109589 |
Isoelectric point | 4.97308349609 |
Runs | 11 |
Runs residual | 0.00653999116217 |
Runs probability | 0.0416084533732 |
Amino acid sequence | MHEHPAYLYSWEDGDCSHQSLGPLPACDLCDQLHLRSRQGGSVCGCDPCEQLLLLVSQLR APGVDSAAAGRPV |
Secondary structure | LLLLLLEEEELLLLLLLLLLLLLLLLLLHHHHHLHHHLLLLLEELLLHHHHHHHHHHHHH LLLLLLLLLLLLL |
PRMN | - |
PiMo | - |