NONHSAT102018

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT102018

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1917 nt

Genomic location

chr5+:70671613..70681621

Exon number

4

Exons

70671613..70671843,70672114..70673407,70681123..70681260,70681368..70681621

Genome context

Sequence
000001 GGTAGTAGAA CAATGGGATT ATGCTGTCAC AAAAAACAAA GAAAAAACAT AATTTCTTAA ATCATGGTCT GTCACTGAAT 000080
000081 CTGGTTATAA AACCTTATCT TGCACTAGAA GGATCTGTAG CTTTTCCAGC TGAGAATGGG GTTCAGGATA CCGAATCAAC 000160
000161 ACTAGAAAAG AGAGAAACTG GGGATGAAGA AAACTCAGCT AAATTTCCTA TAGGAAGGAG AGATTTTGAC ACACTCAGAT 000240
000241 GTATGCTGGG AAGAGTCTAC CAACGTTGCT GGCAAGTCTG ATTCTTTTTT TGATATGGAC CTGTTGGTCC ATATCATCTT 000320
000321 TTCAGAAGAA AAGCATTTAA TTGCCAATGG GAGGAGAAGC CCATAATGTT ACTGTAACTT GGGTATTATG TTAACTGTCT 000400
000401 GTTTTAAAAG AAAGTAGCGT TAAGATAGAT CAGTAACCAA AATCATAGGC TTTTTCTGTG CATTGAACTT TGTGAAAATG 000480
000481 CTGTATAATT TTGACTTACT AGTATTTTTG AACAATGCTT AACATACTAA CCTTACATAC ACTCTAGACC AAAATAAGGC 000560
000561 ATCATAATTT ACACCTTAAT CTCAAAAATT AAGCATGTCT TTGGTGAATG GTTTTATATA TACATAAACC TAAAACATAT 000640
000641 AAGACAAAAA TTTATGTTTG GAGCCTGTGT TCTGTAAAGA GAAGGTTGAT TTGTCTTTTA GCTATCGTAT TTGGAGTGGA 000720
000721 ACTATAATAC AAATGTATAA TAttcttttt tttttttttt ttgagatgga gtctcactct gttgcccagg ctggagtgca 000800
000801 atggcacgat ctcggctcac tgaaacctct gcctcccggg ttcaagcaat tccctgcctc agcctcatga atagctggga 000880
000881 ttacaggtgc ccaccaccat gcctggctgg tttttgtatt tttagtagag gcaaggtttc accatcttgg tcaagttggt 000960
000961 ctggaactcc tgaccctgtg atccacctgc cttggcttcc caaagtgctg ggattacagg cgtgcaccac tgagtccagc 001040
001041 cTATATTCTT GTTTATCAGT TCAAAAATGC TCTGCACTGT TTTTGACTCT TTAAAAATAA CTTAGATTCA AATTTATAGT 001120
001121 AGAAGAAAAA AAATCTTTCA GATAAGAGGT GTTCTCCAGA ATGGAAGAAC GACTTGGCAT GTAAGAAATA GCGTCAGTGT 001200
001201 CCTAATGCAT ATTGTGACTG TTTGCATATA CTTCTGTTTG TAAAAATATC GGTTTTATTT TCAGAGGATT TGTAAGAAAC 001280
001281 ATTTAAATTT TCATTGAAAT AAATGACAAG TCATACTGTC ACTTAAAAAA AAAAAAAAGA CCTTTGTCAA GGAGAGTGCA 001360
001361 GTCAACCAGT AAACTGCAGA TTCTCAGAAT GTTTATTGAC GTACTGATTA TTCATTCTGT TATACTCTAA CATCTGTATA 001440
001441 TTTTTACCAG TATTCTCAGA CCACTTCTAC CAAAACATAA ATCTGTGATT GTGATCTCTG AAAGTCAGTC CTTTTATCTA 001520
001521 CTCAATAACT GATCTGATAA TGTCAACTTT TGAAAACAGA TAGTTATGAC TCAAGGCTTT GAGAATGTAA AGAGACGCCC 001600
001601 TTCACATGTT GAGAAATGGC ACGATTTCAC GTTATCAGTG CAGTTCGGTT CTCAGGGGGA AAGCCCATCC GTACTACCAG 001680
001681 GAGACTGGAT CCGCAAAGTA GACACTTGGT CTCATGAAGC CACTGCTGGG CTCCAGAGAG AAGGAAAAAC TAAGCGGTTT 001760
001761 TAAAACCCCC GCCCTCCTTG GTTTACCTCC ATCATTAAAA AACAACAATG ACAACGACAA CAAAAAACAA AACTAAAACg 001840
001841 acttattgtt tattaattat gttgtggcag acaatatgct gaacattagg cataattaaa ttctttttaa aaattga
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Predicted Small Protein

Name NONHSAT102018_smProtein_800:1093
Length 98
Molecular weight 10639.3389
Aromaticity 0.0927835051546
Instability index 64.0804123711
Isoelectric point 8.80206298828
Runs 16
Runs residual 0.0334096983582
Runs probability 0.0349264705882
Amino acid sequence MARSRLTETSASRVQAIPCLSLMNSWDYRCPPPCLAGFCIFSRGKVSPSWSSWSGTPDPV
IHLPWLPKVLGLQACTTESSLYSCLSVQKCSALFLTL
Secondary structure LLLLLLLLLLHHHHEEEEEELLLLLLLLLLLLLLLLEEEEEELLEELLLLLLLLLLLLLE
EELLLLLLLLLLEELLLLLLHHHEEHHHHHHHHHLLL
PRMN -
PiMo -