NONHSAT102052

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT102052

Source

NONCODE4.0

Same with

,

Classification

sense

Length

429 nt

Genomic location

chr5-:71591376..71616065

Exon number

4

Exons

71591376..71591416,71593459..71593529,71609908..71609985,71615827..71616065

Genome context

Sequence
000001 TTTTGGTACG CTCCAAGATG GCTGCCTCCA TAGTGCGGCG CGGGATGCTC CTGGCGCGGC AAGTGGTTCT TCCTCAGCTC 000080
000081 TCTCCTGCAG GTTGGCCGGA CAGCTTCATT AGGCCCCTGA TTATTCTGTT TTTTGGGTGA AGGGAGCGGT GGGCTTTCAA 000160
000161 GAGGAGAGGA AACGTTTCTG GAATCTGATT GCTAGGGACG CCATTTGGGG TGTTTGGTAG TGCAGAAGAA GGAGACAAGG 000240
000241 TAAAAGATAC CTGCTTTCTT CAGCCTATGT AGACAGCCAC AAATGGGAAG CAAGAGAAAA AGAACATTAC TGTCTTGCTG 000320
000321 ATCTTGCATC TTTAATGGAT AAAACATTTG AGAGAAAGTT GCCTGTTAGT TCTTTAACAA TATCACGGCT TATAGACAAC 000400
000401 ATTTCCTCTC GGGAAGAGAT AGATCATGC
[back to top]

Predicted Small Protein

Name NONHSAT102052_smProtein_17:139
Length 41
Molecular weight 4438.3544
Aromaticity 0.1
Instability index 66.915
Isoelectric point 12.0000610352
Runs 6
Runs residual 0.0280241935484
Runs probability 0.00789024318437
Amino acid sequence MAASIVRRGMLLARQVVLPQLSPAGWPDSFIRPLIILFFG
Secondary structure LHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHEEELL
PRMN -
PiMo -