NONHSAT102125

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT102125

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

722 nt

Genomic location

chr5-:72793404..72794125

Exon number

1

Exons

72793404..72794125

Genome context

Sequence
000001 GCCGGCTGTA GGCCCTACGA GAGACTGCTG GCTTGGGGCG CAGCCCGTAC CTCTGGGAGA GGCCACAAAG GGGTCGGAGA 000080
000081 GCGCGGTCCT GTGCACAGTT AGGGTTAAGT CCGCTCAGTC TCCATTGGGC CCTGATCCTG AAGTTCTGTG CCCTCCGAAG 000160
000161 AAAGGGCCTA TTCACGTTTC CTGGAGACGC CGGAGGTGCC CAGCTTGTGC TCACCACTCA AGCAGCTCTC CCCTTGCTGG 000240
000241 AGGTGTGGGT TGGAGAATTG CAGAATTTCC CTCTCGGCCC GAATGAGCCA TTACCAAAGC ATTTTGTCAA AAATAGTGAA 000320
000321 GTTAGTTTGG CCTTCCAAGG TTAGGTGGTG TGGTAGATTG CGGGACCGAG GTTCAGAATT TCTGGGGGCT GTATCCCCGA 000400
000401 GCCCCACTCC TCAGAATGCA ACTCTGTACG ACGAAGGAAC TGGGTAATCC GCATTTCAGC CAATTTAGCA GATGACTAAC 000480
000481 CACCTTAAAA CGGTCCACAC AATTATCTTG TTTATCAGGC AAAAAAATTG ACTCCTAGGT ACCGAATTGG CATGGATTTG 000560
000561 ACAATTAGCG ATTCACGGTT AAGCAGACTT TATCTATCTT AATCCAATCA AAGGAGAATT TCTGCCTGCT GTGTTTGGAG 000640
000641 AGACAACGCG TGGATGTGAG TTAAACTTTG TTAAACCCAG GACAAGCTTT AAGATAAAAC GACTGATATT TAAAATGGCA 000720
000721 AT
[back to top]

Predicted Small Protein

Name NONHSAT102125_smProtein_551:601
Length 17
Molecular weight 1870.1318
Aromaticity 0.0625
Instability index 45.4875
Isoelectric point 5.71392822266
Runs 5
Runs residual 0.0104166666667
Runs probability 0.0144497438615
Amino acid sequence MDLTISDSRLSRLYLS
Secondary structure LLLLELLHHHHHHLLL
PRMN -
PiMo -