NONHSAT102135
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT102135 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
586 nt |
Genomic location |
chr5+:72861568..72863502 |
Exon number |
2 |
Exons |
72861568..72861737,72863087..72863502 |
Genome context |
|
Sequence |
000001 ACGTCATCTT CGCGCGACGT TCGGTTCGCT GTGTGTGTCG CCGGCTCCTT GAGGGTCCAT GTGATTTTTA CGCCAGTGCT 000080
000081 GCTGAACTGT GCAGGGTAGG GAGCTGGCAC AGTCCGATTA ATTGTCCTTG GGTCGAGGTG TCTCGTCGGA CCCTTTGGGG 000160 000161 CTCAGTGGAG AATTAAGGCA GAGTCACTGT AATTATTTCT AATACCAATT CCAAAATAGT GACTCTTGGA CAATAGTGCA 000240 000241 ATTATATGGA ATTATGGCTG GTTATAAGCC TGTAGCTATT CAGACATATC CTATACTTGG TGAAAAAATC ACCCAAGATA 000320 000321 CACTGTACTG GAACAACTAT AAGGTGAGTG TGGGACGTAA TGAGGGAGAA GGGATTTGTG TTTATGCCAA TTTCTCTAGC 000400 000401 ATATGTTATA CTCTGGATGC TCTAACAGAG AATTATTAAC TGAAAACCAT CTATCAGCAG CTTATAGTTT GGGCAGATAA 000480 000481 TTTGATATCT ATTTTTTCTT GGAATTTTAT GTAAAAGTCC ATACTGCTTA ATCAGATTAA CCATACAAAT GCCTAGCACA 000560 000561 GAACAGATGA TCAATCAATG CCAAAT |
Predicted Small Protein
Name | NONHSAT102135_smProtein_359:424 |
Length | 22 |
Molecular weight | 2545.1777 |
Aromaticity | 0.190476190476 |
Instability index | 54.5380952381 |
Isoelectric point | 8.34417724609 |
Runs | 5 |
Runs residual | 0.00816326530612 |
Runs probability | 0.0387210740153 |
Amino acid sequence | MREKGFVFMPISLAYVILWML |
Secondary structure | LLLLLEEEELHHHHHHHHHHL |
PRMN | - |
PiMo | - |