NONHSAT102159
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102159 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
909 nt |
Genomic location |
chr5+:73618268..73624176 |
Exon number |
4 |
Exons |
73618268..73618833,73620256..73620343,73621637..73621762,73624048..73624176 |
Genome context |
|
Sequence |
000001 CAGTGCTTCT GTTGAGCACA GTGGTCACTC AAAAGAGGCA GAGTGAGTTC AGCCTATCAT TTGAGATCCG AGTATGATTG 000080
000081 GGGAAATATC CTGAAATAGT CTATGATTTG AAGAAATGGA TAGATGGCTA GAATAACATG CTAGATGGTA GTCAAGTTAC 000160 000161 TAACTGCAGA ATTGATTTGA TAAAATTCTC ATCGTGTCTC CTGACTTAGG AGAAATATTG GGTCTGATGA ATGGGTAAAA 000240 000241 TTCCCAGGTG AAAAGAATTT GGTCTGTAAG ATTTGGCAGC ACCCTGAGGT TTGCCATATC TGATGGCCTG GCTTTAGTGG 000320 000321 CAGCACCTAG TGAAGGCCCA GGTGTCCTTC TGACAACCTT TACCACCTAC CGTTTTGTCC TTACTTATGT TGAATCACTA 000400 000401 CACACAGGCT GTTGAATTCA GCTGTCTGTG GAGAAATTAT ACCAACCACA TGGTTAGACA GAAGGAATAC AATATATTGC 000480 000481 TTAATTTGTA TCTGAAAGCT AAGCAACATG GAAAAAAATC AAGCATGCTC AGTCACTTCC ATGAGGACAA ACGAAGACAC 000560 000561 TTCAAGataa tgattgatac aCCTCCCATG CCCCACCTCT CACCCAGGAC AGGATCGAAG TGTTGGGGGA GCCACAACCT 000640 000641 GCTTCACCTA GAAAGAGGAC ATTGACATGG ATCTGCCAGC TTTCTAAGAC TTTCCCCAGA TTCAAGTCCA GTCACATCAA 000720 000721 GTTGCCTTAT TAAAGGGTCT GCCCACTCAA AAGGAGAAAG TGCAAAAGAT GCTCAGCAAG GGTAGCAAAC GCAGTCAGAT 000800 000801 GATACTTCCT GACAGCATCC AAGAGCAAGT CTCACCACCA CATCTGTCAA TAAAAAAGAA AACAAGGAGC TGCCAATTTG 000880 000881 TCTATTTATA GGTGCCAATA AAATCCTGC |
Predicted Small Protein
Name | NONHSAT102159_smProtein_386:664 |
Length | 93 |
Molecular weight | 11051.6816 |
Aromaticity | 0.0978260869565 |
Instability index | 49.3445652174 |
Isoelectric point | 9.88189697266 |
Runs | 8 |
Runs residual | 0.0482483578355 |
Runs probability | 0.0443936583644 |
Amino acid sequence | MLNHYTQAVEFSCLWRNYTNHMVRQKEYNILLNLYLKAKQHGKKSSMLSHFHEDKRRHFK IMIDTPPMPHLSPRTGSKCWGSHNLLHLERGH |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHEE EEELLLLLLLLLLLLLLLLLLLLLHHHHHLLL |
PRMN | - |
PiMo | - |