NONHSAT102221
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102221 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
588 nt |
Genomic location |
chr5-:75003309..75013169 |
Exon number |
4 |
Exons |
75003309..75003700,75008432..75008490,75008679..75008776,75013131..75013169 |
Genome context |
|
Sequence |
000001 GCAGAGCGAG GAGTCGGGAT TTGGTCGCGA GCGGCGACGA GCATTTGTGC AGAATGTCAT CAGATGAGGA GAAATACTCA 000080
000081 CTTCCAGTTG TGCAAAATGA CTCCAGTCGA GGCAGTTCTG TCTCTTCGAA TCTTCAGAAA ATATTGATGA ACTCTTCATA 000160 000161 CACTCTGTAC AAAGGCTTCA ACCAACACAG TAAGAGGAAG AATATGAAGA ACTGCTTCAT TATGCTATAG TGACTCCAAA 000240 000241 TATTGAACCC TGTGCTTCAC AGTCATCTCA TCCTAAGGGA GAATTGGTGC CAGATGTCAG AATTTCTACA ATTCATGATA 000320 000321 TTCTTCATAG TCAAGGTTAT ATATATTTTT CAAGATATCT CTTAATTTAA AATATTACTG AGTTTATTAA TGATACTGAC 000400 000401 AGGATTGTGA AAATGCCTGT CCAGATcagt gattcttctc aaccatttat gtgtattagt atcatctagg ggagcttttT 000480 000481 ACATTTTAAT ATATTATTCC TGACTCTCGT GTGACAGCTT GATTTTTCTT TGAACTTCAT TTGACTCTTA CTTTTATGAA 000560 000561 GAATAATAAA GTTGAAGCAA TGCTATGG |
Predicted Small Protein
Name | NONHSAT102221_smProtein_53:229 |
Length | 59 |
Molecular weight | 6652.5054 |
Aromaticity | 0.0862068965517 |
Instability index | 59.8206896552 |
Isoelectric point | 9.51763916016 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0476947535772 |
Amino acid sequence | MSSDEEKYSLPVVQNDSSRGSSVSSNLQKILMNSSYTLYKGFNQHSKRKNMKNCFIML |
Secondary structure | LLLLLLEELLLEEELLLLLLLLHHHHHHHHHHHLLHHHHHLLLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |