NONHSAT102458
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102458 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1042 nt |
Genomic location |
chr5-:80715798..80743882 |
Exon number |
7 |
Exons |
80715798..80716352,80724404..80724502,80733249..80733277,80736377..80736455,80738472..80738542,80742687..80742741,80743729..80743882 |
Genome context |
|
Sequence |
000001 AAATGTTCAG AGGTGGTGGC TAGCTGGAGG GGAAAAAAAG AACGCATAAG AAGAAAATCA GTGAGCATTT CACTCTCCAT 000080
000081 GGAAATAGTA TTTTATTAAC ATAGTGAAAA GCACACACTG CTTTGGACCT GTGAACTTAG TGTTCAGTGT TCATGGTCCT 000160 000161 CCAGGAGGTG GAGGGCCACC AGGAACACCC ATCATGCCTA GTCCAGCAGA TTCAACCAAC TCTGGTGATA ACATGTATAC 000240 000241 TTTAATGAAT GCAGTACCTC CTGGACCTAA CAGACCTAAT TTTCCAATGG GTCCTGGGTC AGATGGTCCC ATGGGTGGAT 000320 000321 TAGGAGGAAT GGAGTCACAT CACATGAATG GCTCTTTAGG CTCAGGAGAT ATGGACAGTA TTTCCAAGAA TTCTCCCAAT 000400 000401 AATATGAGCC TGAGTAATCA ACCGGGCACT CCAAGGGATG ATGGCGAAAT GGGGGGAAAT TTCTTAAATC CTTTTCAGAG 000480 000481 TGAGAGTTAC TCCCCTAGCA TGACAATGAG CGTGTGATCC ATTACCAAGT CTCCTCATGA AAACCACAGT GAGTCAGCCC 000560 000561 TTCACAGAAC TACTACGGAA GAAAATTATT CATCACAGTG TACAGTTAAA CAAAGGAATC TCAGTCACAC CAAACCAACC 000640 000641 TTTTTATTTC CTGCTCTCTC CCCTCTTTTG TGAAGAAAGC GGGTCCAAAT GTGATTCAAA CAACTGTACG GAGTGGCATA 000720 000721 TTAGAATTGC CCTAAACTGA ACTGCAAATA ATTATGTGTG TATGTATATG TGTGGGAAAG AGAATGTACT GTATATGTGT 000800 000801 ATGTTATACA GACATATACA CATACATACA TTGACCCACA GGACATTGTA AAATATTATC ACATGACATC TTAAGTAGAA 000880 000881 ATAAGTAGGG ACTTTTATTC CATCCTTTTT TTCACGTTTA CATTTTAATT ATTACAAGTT GCTCCTGCCC CCTCCCTGAA 000960 000961 CTATTTTGTG CTGTGTATAT CACTGCTTTA TATAAGTTAT TTTTTAAGGT GAACTCAGAT GTTATGGTTT TGTAAATGTC 001040 001041 TG |
Predicted Small Protein
Name | NONHSAT102458_smProtein_536:739 |
Length | 68 |
Molecular weight | 7691.7992 |
Aromaticity | 0.089552238806 |
Instability index | 69.2285074627 |
Isoelectric point | 8.57305908203 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0450370156254 |
Amino acid sequence | MKTTVSQPFTELLRKKIIHHSVQLNKGISVTPNQPFYFLLSPLFCEESGSKCDSNNCTEW HIRIALN |
Secondary structure | LLLLLLLLHHHHHHHHHHEEEELLLLLEEELLLLLEEEEELLLLLLLLLLLLLLLLLLHH HEEELLL |
PRMN | - |
PiMo | - |