NONHSAT102496
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102496 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
790 nt |
Genomic location |
chr5+:82073616..82074405 |
Exon number |
1 |
Exons |
82073616..82074405 |
Genome context |
|
Sequence |
000001 ATGATATTTG TTCTAGTTTT TAAGAATCAA GCCTATCTCC AGAGAGTTCA AGTGCAATAA AAGAGAAGAT GAGAGGGTAG 000080
000081 AACTGATTTC TAATCTCAGA AATGCTTGGT AATCTGGATT AGGAACAAGT CAAACATACC CAAATGAAAG ATGATAGTGT 000160 000161 TACCAACAGA GGAGTCATTT GAAAAGTGCT TATGCTCATG AATTCTCAAA GTGTGAAGAT CCATCTTTGT GGACCCTGTG 000240 000241 TGCCTATTGT GTACCCACAC TACTTCTTAA TGGATTTAGC ATGGATGAAA TCTATGAAAA CATTTCTAAA TATCAAGTGG 000320 000321 AGGCAAGCAC AGGTGAAGGC AAGGTAGAAT GTAGTAAAGG CCAACCTGGT ACATTTGCAT GATGCAAATG TACGGATGCA 000400 000401 GGCCTCAGCA GAAGTATCCA TGGAAACAAA CTTTCTGGGG CTCTGAAGGA GCTGTGGATG GAAGCATATT CAGTCCTCAC 000480 000481 AGAACCAAAT GAGTACCAGT TTATGGTTCA GAAAGCCAAG AATTCAATAT AGAAGCACAT CAAGGGAAGA AGATATAGGG 000560 000561 GCCTACAGTA ACCCATTTTC TCTATTCATT TAAACATAAC TCCACACATC ATAAGGAAAA TGTACAAGAA AATTTATGAA 000640 000641 GCTATATGAA ATCCAGTCTA AGGGGAAAAA AATTCTAAGA AAAAGGTACT TTTATTTTAA ACTGAACGAT TCCAAAATGT 000720 000721 CTCTTGCCCA AAAGACAAAT GAGGTAACTC AGAAGATAAG CATCCTCAGA GATTAGAAGT GTGCAGCAAA |
Predicted Small Protein
Name | NONHSAT102496_smProtein_191:346 |
Length | 52 |
Molecular weight | 6054.3378 |
Aromaticity | 0.117647058824 |
Instability index | 46.8450980392 |
Isoelectric point | 9.92474365234 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0492467257173 |
Amino acid sequence | MLMNSQSVKIHLCGPCVPIVYPHYFLMDLAWMKSMKTFLNIKWRQAQVKAR |
Secondary structure | LLLLLLLEEEEELLLLLLEELLHHHHHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |