NONHSAT102669

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT102669

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1664 nt

Genomic location

chr5-:87960264..87980753

Exon number

4

Exons

87960264..87963409,87966854..87966903,87968783..87968846,87980475..87980753

Genome context

Sequence
000001 CTCCATCCCC CTTTTACTTC TCTCTCCCCC GTCTCTCCTC CCTCCCGCCT CCTTTCTCCC TCTCCCCCTC CCTCTCTCCT 000080
000081 CTGAATAAGC AAGCTTTTGC CTCTAAAAGT CACAAGTAAT CCTCGTGTGT GACAGAGAGA GAGAGAGAGA GAGAGAGAGA 000160
000161 GAGAGAGAGA GAAACGAGCT GGCGGAGAGG AGCAGAAGGC AGGAGGGGAA ATCTGGCACA ACGGCTGGGA GAGGAAACTT 000240
000241 GATGCTTCTG GGCCACCATT TGCCAGGGCC TCGCTCGAGC CGGCGCCTCG GTTCCTGCCC AGCTGGATTT GGGGGGCAGC 000320
000321 ATTGCCTGGC GCAGGGAGAT CAAATGAGAC TGCAAAGAAG CATAAAATGA ATAGACAATC CAACCAACCA AAGACCGGGG 000400
000401 GCAGCAGCAG GCCAGCAAGA CGGCATCTTC TCCTTCCCAG CCTAGAAGCC CTGTGAAATC GAGGATCTTC CCCCTAAAAC 000480
000481 ACATACACAC AAGATATGTG CAATCAAGCT GCCACCGCTT GGTAAAAAGC CATGGTGCCT AACCAAAAAG GATCAGGAAC 000560
000561 AGATCCTTGA ATCAGCTGTC ACTTCTATAG AATGGGATTT TTTTTTCCTT CCTCCTTAAC CTGCGCTGGA AATTGCCGTT 000640
000641 GGCTTTATAC ATCTCTATAG AGAGAGGCTA AAGAGTCTTG CGTGAGAAAG AAGCAATTTA CAATGCAAAT AGAGGCCTGT 000720
000721 GAAGGGACGG ATGCTGCTGC TCACTCGTAA CAGCTTGCTG CACCTTAATA GCTGGTTTTA TTTTCTGATA TTAATAGATG 000800
000801 AATTGTTGGC TAACGCTGCC GGAGATTACT TGCTGAAAGG AAAAAGAAAA GTTCGGAATA AACTCTGAAG GCAACAGATC 000880
000881 TCGTTTGGAT GTTTTAGCCG CGCACACACA CAAACAGAAA CCAGGTCATA TTTACATAAA AGGAGGAATC TTAAGCGCGG 000960
000961 CAAGTATCCT GGACGACCAC TCTTCGGTAC TGCCAGAAAG GATCAGGACC TGGAGTCTGG CAAGAGGAAG ACAGAGGCCT 001040
001041 GTGTGGGAAG CGAGTTGTTA TCTTTGGTTA TCTAGCTGTA TGAGTGTATT GGTCTTCATA AAGCTAGATA ACCGAAAGTA 001120
001121 AAAACTCCTT CAAGATCGCC GGGGAGCGTG TGAGAATGAA AGACTACAGC CGAGAGACAG TAAAAACCAG AAAGGTCAGG 001200
001201 AATACTTATT GAATCTAACT TTGTTTTTGT TTTGTTTTTT TCCTTATGAT TAAAGGTGGG ATGAGAGAAA ATTAAATGAC 001280
001281 ACACACATGC TAAAATATCA AGGTTCCAGA TATGTCTTGA GAGGGGTTGT TGCAGCTGCA AAGGAGAAGT GTATAGTGAT 001360
001361 AATGAGTAAA GATGCATGTG CAGTTTGTTC TATTTTAAGG CAAAAGTTAT ATCAGGGATT TTTTTCTTAG AAAGGTGTTG 001440
001441 CAGAGATGTC TGGTACCTAG TTTAAAAATG ATTCCATAAT ATGTAGACTT GGGCAGTTCC TTTGGGAGGC ACCTCCCTCT 001520
001521 CAAAATTTGA AGATTGTGCT TGGAAATTAC TTTACATGTA TTTGGGCTGT ATGTCAATTT GTACGAAATT AGACTTTCAG 001600
001601 AAAAGTTTAT ACTGGAAGGT TAATAATTTG TATCTACTGA GGACTTAGAG CTAGCAGGCA AAAT
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Predicted Small Protein

Name NONHSAT102669_smProtein_1286:1429
Length 48
Molecular weight 5274.3216
Aromaticity 0.106382978723
Instability index 40.1446808511
Isoelectric point 9.66351318359
Runs 7
Runs residual 0.0173404255319
Runs probability 0.0251974663739
Amino acid sequence MLKYQGSRYVLRGVVAAAKEKCIVIMSKDACAVCSILRQKLYQGFFS
Secondary structure LLLLLLLLHHHHHHHHHHHHLLEEEELLLHHHHHHHHHHHHHHLLLL
PRMN -
PiMo -