NONHSAT102806
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102806 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
594 nt |
Genomic location |
chr5-:92880597..92916419 |
Exon number |
5 |
Exons |
92880597..92880621,92889467..92889569,92890580..92890701,92899070..92899166,92916173..92916419 |
Genome context |
|
Sequence |
000001 CTAAATCGTA CTCCCCATAC AGTCagaggc agggagtcga gggcagaggc agcaggcgga gagagggaga tagggcgagg 000080
000081 gaaggagaac gcggagagag acgaagggag tgggagaCCA GCGACAGCGA GCGCCAGGGC ACCGCAGGCA CACTGGATGC 000160 000161 CCAGTCCGCC GGCCCAGCCG CCCTCGGACC CTGGACCGTG CGTCGTGGGC ACCAGAAACG AGACTCGGCC AAATCCTGCC 000240 000241 TCACCAGGTA GATGAAACTC AAGAGAAAAG GTGTGGATAA ATGAAACTAG CCCATGATGA ACCTGTTTTC TCCGTGACCA 000320 000321 CAATATTAAC CAGGATGAAT GGCGGTGGCA GTGGGCCTGC ATCACAGGTT GCAGCAGATG TTCTCAATAT TTCTATTAAA 000400 000401 ATTTCCTTAT TTCCATATGC AAGAGGAGCC CCAGAGCTGC ATCCTTATGG TAGCTACCAT GCCGTGatgt aagctgccat 000480 000481 tcactgggga gctttggcaa tagaattggc tagatcagga agcctatgtc aactatggaa caacaacttg cagctcatct 000560 000561 ctattgatga tggaatctcg ctatgtcacc aggc |
Predicted Small Protein
Name | NONHSAT102806_smProtein_338:466 |
Length | 43 |
Molecular weight | 4921.9126 |
Aromaticity | 0.119047619048 |
Instability index | 78.5857142857 |
Isoelectric point | 6.80682373047 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0212986095339 |
Amino acid sequence | MAVAVGLHHRLQQMFSIFLLKFPYFHMQEEPQSCILMVATMP |
Secondary structure | LHHHLHHHHHHHHHHHHHHHLLLLLLLLLLLLEEEEEEEELL |
PRMN | - |
PiMo | - |