NONHSAT102846

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT102846

Source

NONCODE4.0

Same with

,

Classification

sense

Length

884 nt

Genomic location

chr5-:94848836..94852472

Exon number

4

Exons

94848836..94849349,94850559..94850627,94852057..94852113,94852229..94852472

Genome context

Sequence
000001 AATTTAACTT CTTTTCAGTG TCTGAAAAAA GCAGTGAGAC TCGACAGTAA TAATCACTTA TACTGGAATG CTCTTGGTGT 000080
000081 GGTTGCATGT TACAGTGGTG AGAATTGAGT AACACTTCAA TATTTTTAGA AGATTGTGTA TTTCAAACAA AGTTCAGTTT 000160
000161 CATCAGGTTT TGTATTTTTC AGGTATTGGA AATTATGCCC TTGCTCAGCA CTGTTTCATC AAATCAATCC AGTCAGAACA 000240
000241 AATTAATGCT GTTGCATGGA CCAACTTGGG AGTGTTATAC CTCACAAATG AAAACATTGA GCAAGCTCAT GAGGCTTTCA 000320
000321 AAATGGCTCA ATCCCTTGAT CCATCTTATT TAATGTGCTG GATTGGACAA GCTCTTATTG CTGAGGCAGT TGGAAGTTAT 000400
000401 GACACCATGG ATCTCTTCAG GCACACTACA GAACTAAATA TGCATGTAAG AATCTGAACA TTCTTCTTGA GGATTCATTA 000480
000481 ATGAGAAAAG TGTTATCCTT GTTAAGGGAA TGAATAGATA TTGggctagg catagtggct tatgcctgta atcccagtga 000560
000561 tttgggatgc caaggcagga ggattgcttg aggccagcct ggacaatata gcaagaccct gtctcttaaa aaaaaaaatt 000640
000641 aaaaattagc caggtatgat ggtgtatacc tgtagtccta gctactcagg aggctgaggc aggaggattg agtcctggag 000720
000721 tttcaggata cagtgagcta tgatcatgcc attgcactcc agcctgggca acagagcaag attctgtctc taagaaaagg 000800
000801 aaaaagaaaa TGAATAGATA GTGGTATTAG ATGTTAATGA CATCAGTTGT TTTTATTCTT TATTCTTTCT TAGAAACAGA 000880
000881 TTAG
[back to top]

Predicted Small Protein

Name NONHSAT102846_smProtein_194:352
Length 53
Molecular weight 6000.1088
Aromaticity 0.0576923076923
Instability index 46.0365384615
Isoelectric point 9.86492919922
Runs 7
Runs residual 0.0157540199913
Runs probability 0.0455749867515
Amino acid sequence MPLLSTVSSNQSSQNKLMLLHGPTWECYTSQMKTLSKLMRLSKWLNPLIHLI
Secondary structure LLEEEEELLLLHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLL
PRMN -
PiMo -