NONHSAT102972
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102972 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1411 nt |
Genomic location |
chr5+:98265713..98271477 |
Exon number |
4 |
Exons |
98265713..98265745,98265815..98265924,98266027..98266064,98270246..98271477 |
Genome context |
|
Sequence |
000001 AATTCTGTTA CACTTTATTT TTTTCAGTCT GCACATGTTG CTAGGTTGGT GTTGAACTCC TGAGCTCGAG CGATCCACCT 000080
000081 GCCACTGCCT TCCAAAGTGC TGGAATTACA GGCGTGAGCC ACGGCGCCCG GTGGCCGAGG TTATAATTAT TTTTCCCTTG 000160 000161 TGGGAAATAT TCCAGTTTTA GAATTTCTGA TGCCTTTGAA TTGCCCAGGA GGTTTCTGGA TAGAACCATG GAGCTAAGTG 000240 000241 AAGTCTAGAC TGAAAATTAA AGCTGTTAAG TGTGAAGTGT GTAGGGAAAA ATTAAAGTCT TGAGTATTCA TGAAGTAAAC 000320 000321 TTGGAAGACA GCCTAAGTGT GTGCAGTGAA GAATTCCAGT TTATTTTTGA CTAGGTAGAG GAAGATGAAC TGGATAAGGA 000400 000401 GGAGTTACAC AGTTACCAGC AGGGTGTTGC GCTACTGAAG ATGAGTAAGG CTTCATGGAA AGAGTGGTGA ATAATGTCCA 000480 000481 GTTGCTGTAT AAGAATTAGG TGGAAGGTAG CACATATTAA TCATCTAAAA AACAAATACA TTAATATCTT CAAAGTCTGA 000560 000561 TTTGGGAGAA TTTGTTTTCA TTGTTTTTTT TCAAACAGGA ACTGAACAAT ACCATCATTT ACAGTTACGG GCTATGGGTG 000640 000641 GTCACTTAAT TGGTGTGATT TGAGACTGAG AACCTCCTGT TCCACAAATC TATACTTCAT CCTCTACTAA TGCTTGAAAA 000720 000721 GTCATTGATA GAAATCTGTT TTAAAGCATA TATTCCTGGG AAGAGTAATA TGTTTAGAAG ATACATAATT CTCAGCTGTG 000800 000801 CCAAAATTTA GAATTAACTG AGGAGTTGTG TACTAAAAAT GCTCAAGATT ATATTCCATG GTTCTGAGGT GGGGCCTTGG 000880 000881 CACATGCATT TTTTTAAAAG CTCCCCTAGG TGATTCTAAT GTGCCATTGT TGAAAAATCA TTGACAGCAT CCTATTAACA 000960 000961 CAGTATTGAC TCATAACGTT TTGTTTAGAT GACATGTGGG TAGGACAGGA CACCTATTTA TAAAACAGTG GTTGGTAATG 001040 001041 GCCATTGAGT AGGGAGGATT TCGCCCAAAA GAGAACATTT GCCAAAATCT GGAAACATTT TTGTGGTCAT CCCAGTGGGT 001120 001121 GGGTTTTGCG GAGTTGGCAC TATTCATACA TAGTAGTTAG AGGCCAGGAT ACTGTTAAAA ATCCTGCAGT GTACTGCACA 001200 001201 GCCCCCTCTC CTCTCATAAG AAAGAATTAT CTGGCTCAAA ATGACAAGAG TGCCCTTGTT GAAAAAACTT GCTGTAAGCG 001280 001281 ATGGCAAGCT AGGTAGTATT TTCCAGTGAA ATCTTACACA GATTGGAGTT GTGGTTTGGT AAGGGTGCTA ATGAATGAGG 001360 001361 ATCTACTCTC TACCTAACAG CTTAGCCAAA ACTCACCCTT TCTTATAACC A |
Predicted Small Protein
Name | NONHSAT102972_smProtein_473:559 |
Length | 29 |
Molecular weight | 3416.1411 |
Aromaticity | 0.107142857143 |
Instability index | 86.6607142857 |
Isoelectric point | 10.2073364258 |
Runs | 7 |
Runs residual | 0.0467806841046 |
Runs probability | 0.0368561839149 |
Amino acid sequence | MSSCCIRIRWKVAHINHLKNKYINIFKV |
Secondary structure | LLLLEEEEEEHHHHHHHHHLLHHHHEEL |
PRMN | - |
PiMo | - |