NONHSAT103025
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103025 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
672 nt |
Genomic location |
chr5-:101707649..101726933 |
Exon number |
4 |
Exons |
101707649..101707775,101709041..101709198,101724392..101724529,101726685..101726933 |
Genome context |
|
Sequence |
000001 CAGGATATGG AGAAATGGGG AGTTGTAGTC CTTTAACAGG CCAGCTTAAA CTCTGTCAAT TGGCTAAAGA TTCTTAGTAC 000080
000081 AATTGATGCA CCAGAAAAAA AAAATGATTA GCCTTGAATC TAGCATACAT TCTTAGTGCT AATAACAATG ATGTGCTGAT 000160 000161 TATATCATTG CTATTTACTT TCAGGGTTGT ACCTGACAAA CTGCGTTCTC TGGCCTTGGG TGTAAGCTAT GTGATTTTGA 000240 000241 GAATATTTGG GACTATTCCT GGACCATCAA TCTTTAAAAT GTCAGGAGAA ACTTCTTGTA TTTTACGGGA TGTTAATAAA 000320 000321 TGTGGACACA CAGGACGTTG TTGGATATAT AACAAGACAA AAATGGCTTT CTTATTGGTA GGAATATGTT TTCTTTGCAA 000400 000401 ACTATGCACT ATCATCTTCA CTACTATTGC ATTTTTCATA TACAAACGTC GTCTAAATGA GAACACTGAC TTCCCAGATG 000480 000481 TAACTGTGAA GAATCCAAAA GTTAAGAAAA AAGAAGAAAC TGACTTGTAA CTGGATCATC ATTGTATTCT CCAAGATTTG 000560 000561 TTTCTGTGCC CAACTTTCAG AAGAGGAAAA TCACACATTA TGTTTACATA AGTAGCAAAA ATATATTTAT GGTGATCTGC 000640 000641 ATTTTCATAA TAAAGTGTCC TATTGTGAAA CA |
Predicted Small Protein
Name | NONHSAT103025_smProtein_278:529 |
Length | 84 |
Molecular weight | 9614.33 |
Aromaticity | 0.10843373494 |
Instability index | 46.8855421687 |
Isoelectric point | 9.15057373047 |
Runs | 11 |
Runs residual | 0.00749665327979 |
Runs probability | 0.0470283117343 |
Amino acid sequence | MSGETSCILRDVNKCGHTGRCWIYNKTKMAFLLVGICFLCKLCTIIFTTIAFFIYKRRLN ENTDFPDVTVKNPKVKKKEETDL |
Secondary structure | LLLLLEEEEEELLLLLLLLEEEEELLLLLLEELLHHHHHHHHHHHHHHHHHHHHHHHHHL LLLLLLLLLEELLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiii iiiiiiiiiiiiiiiiiiiiiii |