NONHSAT103036
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103036 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1584 nt |
Genomic location |
chr5-:101944196..102007168 |
Exon number |
3 |
Exons |
101944196..101945470,101953562..101953632,102006931..102007168 |
Genome context |
|
Sequence |
000001 gactcggaaa gggaactccc tgaccccttg cgcttcccga gtgaggcaat gcctcgccct gcttcgactc gcgcatggtg 000080
000081 cgcgcacgca ctgacctgcg cccactgtct ggcactccct agtgagatga acccggtacc tcagatggaa atgcagaaat 000160 000161 caccagtctt ctgcgtcgct cacgctggga gctgtagacc ggagctgttc ctattcggcc atcttgtctc ctcccGTGGG 000240 000241 CTTTTGGCTC AATTCTGAAT AAACAGTGAA CATCCATGTG GGAGCAATGA GGAGGAACTG TAGCATCTGA ACTGGAAATT 000320 000321 CCCTGTCTCC CCTTAACCAG CACTGGAAGC AGATGGGAAG AGAATAGCTG TGACTGACTC ACACTCTAAC CCAGCAACCC 000400 000401 TCAGCATACA AGTGGGAGAC CATAAAGTTT TTCAAGACCC CAAAAGAGGC CAAAGGTCTG ATAATTGCTG GGAGAAGGTC 000480 000481 CACTATCCAA GAAGAGAAGA GGAAAAGGAA TTAAAGTCTC CAAGCACTGG GGATGCAAGA AGAGAGTTGC ACAGGAGAGA 000560 000561 AAGAAGAAGT TGTCCACGGG GTGACCCTGC AATTGGAGGG AAATGCATGT GGATATGTGC AGGGAGTCTA GGAAGTGAAG 000640 000641 CCTTAGTGAT CATTTACAAG AATGAGGGTT AGGTAAAATA AGGGATGCAA AGCCACCTGT AGTCTATTCT AACCTCACTC 000720 000721 CATCACTCTA TACAATCTGT GTTTTATCAT CTGAAATGTT AAGTAAAGAC CTGTTTGGGT CTTCTTCAGA ATCCCATACA 000800 000801 TTTGAGTTCA TTAGTCAGAA AAAGGGAAAA TACCACCACC CCATCCTGGA ATGGCAGTCA TGTACACTTT TATAATGAGA 000880 000881 GATTGGGCAG CAAAGGGGGC CCCTTGTGGA CCTCACCCAG CCAGAGAAGG AGGCAGAATG TTTCCTTTAC TATCTTTTCC 000960 000961 TCTCCCCAGA GGAACACTAC ATATTGTTCC CTCCATGGGC TTAAGAGAAG GTGCCAGGGT TACAGATAGA TATATCGCTA 001040 001041 GCTGTAGAGC ACAGGGTGAA TTGGGATGTC CATGTACAAA GCTAGGGACA GGAGAATCAG TTTAAAGACT TTAAAAATAA 001120 001121 TTAGGAAAAA AAGGAAGGCC TGACCCAAAG CTTAGGAGTG CAGGTAGAGA AGAGATGGTG CCATGATATA CCATGTCTCT 001200 001201 GGGACTTTTC TGTATTCCTC TTCCTCTGTA TACTGTATTG CCCTCATTCC CTATTTATTC AAAATCTGTG CTACCTCCAC 001280 001281 TGCGAAGACT TCCACGAGAA AATTCAGATA TTTCTTCTTT TGTGGACACT TTCTACCTTA CAAATAAGTT AATTTTAATT 001360 001361 CAAGGAAGAG TTTTTCCGGA ACCCTGTTGG CCTGCTCACA GGAATGTAAG TTCCTTAAAT CTAGGGCACA GTGTCTTTGA 001440 001441 GAACTGCAAT CACCTACATC AACATGACAT AGCTATTAGG ACTAAGAACA GAGACCACCT GTGTCAACAT GAGTTACTAT 001520 001521 TTTTTTCCGT GAAACATTTG TCCAAGAAAG ATAAGACTGT AACCAATAAA TAGTTTGCAA GTAA |
Predicted Small Protein
Name | NONHSAT103036_smProtein_755:874 |
Length | 40 |
Molecular weight | 4541.1235 |
Aromaticity | 0.128205128205 |
Instability index | 62.8076923077 |
Isoelectric point | 6.80987548828 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0214773597126 |
Amino acid sequence | MLSKDLFGSSSESHTFEFISQKKGKYHHPILEWQSCTLL |
Secondary structure | LLLLLLLLLLLLLLLEEEHHHHLLLLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |