NONHSAT103364
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103364 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
722 nt |
Genomic location |
chr5-:115780104..115780830 |
Exon number |
2 |
Exons |
115780104..115780729,115780735..115780830 |
Genome context |
|
Sequence |
000001 ATGCGACAGC CTGAGAACGC TGGGCAGCAC CACACCCTCC AATTCACACT GCCTTCTAGT TGTGCCAACT GGAACCACCC 000080
000081 TTTGGCTGTG CTGCGAGGAC CCCAGTGTTG TTGTGGGTGT GTCAAATCCC CTTTCATCCT CAAGAGCTCC CTGCTTCCCT 000160 000161 TAGATTATTT CAATACGGTG ATATCCTTAT TTGCTAGCAG AAAAGGGACT AACGTCCCAT TCCTCTTTTC TGCTGCGTCC 000240 000241 ACTGGCTAGA GAGCAGGCGG TGCGCGGTTG GGCAGACACC TGGGAGGAGT CTCCAAGCCA TGTGCACAGC ACACACGTGC 000320 000321 AGTGCACACA AAGAAATGAC ATGGAAATAG ATGCAGGCAG GCTGGTCCCT GCTGTGATTA ACGAGTAACT CCAAGTACAA 000400 000401 GGCCGACCAC AATGGATGCT GCAAAAACGT TGACTGGGGC AAAGGatttt ttattttatt ttttattttg ttaattatGT 000480 000481 TTTTAGGGGA TGGGAGGTGG TGTGTGTTTT TCTCCTCTTG GTTTTCATTT GCTCAAGCAC ACAAAAGGGA CTTTTGTTTA 000560 000561 CTCTATCATG AACAAAGGAA CTGTCCACAT ACTGTAAACC ATGAGCAGTG TTGTTGTTGT TTTTTTAAAC AGTATATTTG 000640 000641 GTGGTCTCTT TGTCTGCTTT TATTTCCAGT TCGATCTTCT GGGTTTAGTT TTGTCTTTAA AAAGAATTCA AAAAAAGACT 000720 000721 GA |
Predicted Small Protein
Name | NONHSAT103364_smProtein_476:721 |
Length | 82 |
Molecular weight | 9819.3219 |
Aromaticity | 0.222222222222 |
Instability index | 46.9172839506 |
Isoelectric point | 8.88006591797 |
Runs | 11 |
Runs residual | 0.00637723816532 |
Runs probability | 0.058662941016 |
Amino acid sequence | MFLGDGRWCVFFSSWFSFAQAHKRDFCLLYHEQRNCPHTVNHEQCCCCFFKQYIWWSLCL LLFPVRSSGFSFVFKKNSKKD |
Secondary structure | LLLLLLEEEEEELLHHHHHHHHHHLLEEEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHH HHLLLLLLLLEEEEEELLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHH HHHHHHHHLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTT TTTTTTTTiiiiiiiiiiiii |