NONHSAT103376
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103376 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
825 nt |
Genomic location |
chr5-:116025841..116040866 |
Exon number |
4 |
Exons |
116025841..116025895,116030922..116031274,116032091..116032405,116040765..116040866 |
Genome context |
|
Sequence |
000001 tgataactat tcttttcTCc tcagacaccg agttaaagaa ggaagaggtt tatcggccgg tagcatcggc aggactcctg 000080
000081 tctcaagagc cgagctcccc agCACAATTT TCACTCCTCT TTTTAACTAA AAACTGTCTC CTGGCTTCAG TTGCAAGGGA 000160 000161 TCTTCATGAG TGCGACACAA AAGAGAGTGG GAGAAAAGCA TGAACTACAG CCCAGAACAG AATGACTAAT TCCTGGAGGA 000240 000241 CGAATTTGCA TTCAGCTTGA AGGCCAAGAG GTTAGCATTT CCAACACAAA ACAATTTCGA GTGGGCTCAA TGCTCCCAGT 000320 000321 CTTGTCTTAT CCTGGAACCG TCTCTGAATT CCCCTCTTTC CTTGTTGCTG TGCCTATGTC CTACTCCAGA GAGAGCTGAT 000400 000401 GGTGAGATGG AACACAAgtg gagtttcact cttcattggc caggctggag tacaaatggt gcaatctcgg ctcaccgcaa 000480 000481 cctctgcctc ccaaattcaa gtgattctcc tgcctcagcc tcctgagtag ctgggattac aggcacgcac catcatgcct 000560 000561 ggctcatttt tgtattttta ggaaagacag ggtatcacca tggtggccag gctggtctcg aattcctgac ctcaggtgat 000640 000641 ccacccgcct cagcctccca aagtgctagg attaaaggca tgagccactg cacccagccT GTTTTCTCAA ATTTAATTAA 000720 000721 TGATCTTAAA AACAGAAATA ATAACAACAA CTGTAAGTAT TTTTCAGTTG cctcccaggc tgaagcaatt ctctgcctca 000800 000801 gcctcccgag tagctgggat tatag |
Predicted Small Protein
Name | NONHSAT103376_smProtein_398:529 |
Length | 44 |
Molecular weight | 4640.3438 |
Aromaticity | 0.046511627907 |
Instability index | 67.8441860465 |
Isoelectric point | 9.35089111328 |
Runs | 8 |
Runs residual | 0.0287431408414 |
Runs probability | 0.0439962020845 |
Amino acid sequence | MVRWNTSGVSLFIGQAGVQMVQSRLTATSASQIQVILLPQPPE |
Secondary structure | LEEEELLLLEEEEHHHHHHHHHHHHHLLLLLLEEEEELLLLLL |
PRMN | - |
PiMo | - |