NONHSAT103486
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103486 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
555 nt |
Genomic location |
chr5+:122139189..122144406 |
Exon number |
2 |
Exons |
122139189..122139308,122143972..122144406 |
Genome context |
|
Sequence |
000001 AGAGTGAATT TTCAGTGAAA AGAAGATTCA GCGACTTTCT TGGTTTGCAC AGCAAATTAG CAAGCAAATA TTTACATGTT 000080
000081 GGTTATATTG TGCCACCAGC TCCAGAAAAG AGTATAGTAG GGATGACCAA GGTCAAAGTG GGTAAAGAAG ACTCATCATC 000160 000161 CACTGAGTTT GTAGAAAAAC GGAGAGCAGC TCTTGAAAGG TAATTCTAGA CAGCTATATT TTATTACTCT CATGTTTGTA 000240 000241 CCTTAATATA AATGTAATTC CATTATATGG CAAAACTGTG TTTTAATGAT TAAATTTTTT CCAAAGTACC ACTTGGTGGC 000320 000321 TTTTAAGACT GCTTTAAACT TTTTTAAGAA AATTACTTCT TTCAACAAAG TACTGTATAA TTGTTCTGTA TAATTTTTAG 000400 000401 TAATCCTCAT CAATAGTCTA ACAAAATAAC ACTTGTTTTT CTATTATATG CTACAAGCAG GAGCATATAA TAGAAAACAT 000480 000481 ATAAAGACAT GAGTTAGCTG GGGATAGAAT TGTATCATAG GTAGTCACCA AGAGTTACTA AGAAACTGCT AAACT |
Predicted Small Protein
Name | NONHSAT103486_smProtein_122:202 |
Length | 27 |
Molecular weight | 2982.3722 |
Aromaticity | 0.0384615384615 |
Instability index | 65.9461538462 |
Isoelectric point | 9.51885986328 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.0483130189012 |
Amino acid sequence | MTKVKVGKEDSSSTEFVEKRRAALER |
Secondary structure | LLEEEELLLLLLLHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |