NONHSAT103492
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103492 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2238 nt |
Genomic location |
chr5-:122178922..122181159 |
Exon number |
1 |
Exons |
122178922..122181159 |
Genome context |
|
Sequence |
000001 GGGCGTGCCG GGGGCCGGAA GCAGAGGGCG CAGGGCTCCA GGCGCCTGGG TTTCGGGCCT AACGGGCGGT GGAGATCAGC 000080
000081 TGGGCCCGAA AGAGGCGGGG CCAGAAAACC TGAGTCTGCA GAAACGGGGT GTGCGCGCCA ACGCGCTGGG CGCGGGGACT 000160 000161 GGGCCGCACC CGGCGCTCCC TGCCCTGCGG ACTCCGGCTG GAGCTTGATT TGCAGTTTGC TAGACGCCAC CATTAAGAGA 000240 000241 TTGCCAGACA GCAAAGAATA GAAAGAGTGG CGCTTTTAAC TTTTGTTTTG GTTGGTTGAA TTTTTTTTTT CCCTCTCGGC 000320 000321 TGGCATTAAC AGCGGTGAAC CAGCCGGCTT ATACCAAGAC TCTCCGAATT CCCTTCGATT CGAAGGTCAG CGTCTCCTGA 000400 000401 GTTAGACGTC GAATCTGAGA ATGGTGGTGT ACCACAGAGC TCGAAAGTGA GCCCGAAAGT TGGCCGGTCA CTAAGACAAA 000480 000481 CGCTCTGGCT TCACGCTGCA GTTCTAAAAT GCCGCCTTTA ACTGTGAAGT ACTTTTTAAC TGTGAGGGAA AAATAGAATA 000560 000561 CGGAAAAAAA AAGGACTGAA CCCGTGCCTC GGACCAGGGT CTAGTAGGCT GAAGGTACCT AAAAGATTAA GTGTCCCGGC 000640 000641 GGGGGAGGCT TGATTATCAA GTTAGTCAAG TAAACGTTGG GTTTCTTCTT TAGGTTAGCG CACCGAGCAG AATAGAAACG 000720 000721 TGGACGTGAC TTGTAGGTCA CTGAGAAGTG ACCTCAGCCA TCCAGGAAAA AACCAGCCAG CGAGCTTTCT TGGACTGTAA 000800 000801 ACAATTGCAC TTAACTCCGT TTGTCCTTGA GTGCAGAGGA CATTTCAGCT TAGCAAACTC TAGACTTTAT GATGGGACCC 000880 000881 TGAGCCGTGC AACAGAGGGA TAAGGCAGCT TCTCGTTTTA GGAACTTACC TGATGTGGAC CCCTCTACAT TAGTCTCATC 000960 000961 TGAAGATCCG TCCTCCTAAC CCAGCACTCA CACATTTGCA GCTCCAGGAT GTGCCCTTCT CTCAAAACTG TGCCTTAGCT 001040 001041 GTGCCCTGTG ACTACACACC TTTCTTTCAC TTCTGGCCAG CACCTCCTGA GGTAACTAAC CAGCTCTGCG GACGATAAGC 001120 001121 TATCTGAGTT CAGAGCCCAG CTTGTAGGTT ACCTTAAGCC TCTGGTGACT ATACACTGTA TGTATGATTT ATTTATCTAC 001200 001201 CCTACCTACT AGGTTTTAGG GCAAGCATGC TTTTAAAAAC TCGTCATCTC GTGGTTGGCA TAGTACCCAG CACGTAACTT 001280 001281 ACGTAAGTAC TCGTCTTTAC AAAACTAGTG GAATGCAGCA GGTACTATGT TCGGTATCAC ATAATGTCTC ATTTCATCTC 001360 001361 TATAACAATC ACATggccgg gcgcggtggc tcatgcctgt catcccagca ctttgggagg ccgaggtggg tgtatcacct 001440 001441 gaagtcaaga gtttgagatc agcctggcca acatgatgaa accctgtctc tactaaaaat gcaaaaatta gccagattac 001520 001521 agggtggtta ctcacccctg taatcccagc tacttgagag gctgagtggg agaattgctt gaacccatga ggcggaggct 001600 001601 gcagtaagcc gagatcacgc cactgcactc cagcttgggt gacagagcaa gaccctgtct caaaaaacaa aaacaaaaca 001680 001681 aaaaaCCAGT CACATGAGGA AGCGTTATGA TAAGACACAA CATGAGTTTC AAGGGCCTCC CACCTCAGCC TCCCAAGAAT 001760 001761 CAAGTTTTTA ATATGCTTTC CATAATATCC TACAACCTGT TAGTAGCCTA AAATATATAT TTTGGTAATG GCATGGCTCA 001840 001841 CCCATTTACC TGTTGGACTT AGGCAGAAAT GTGTGATTCC ATGAAGGTCT GATAAATGGT CCAAATGATA TCCATTTGCT 001920 001921 GTATTCCACT AATAGCTGTG TATAATTTAC TTTTCCCTTG CTGAAAATGT ATACAAACTA TCAATGTGTG GGTGTGTTCT 002000 002001 TGAGGGTCTA TTAGCCCAGC CATAAATggt aattgttacg atttcagtta ttatagatgg cgtaattcag gctcacggag 002080 002081 agtaagtatg aaattactag ctaataatta gaagaactaa atttctaacc aaattctctg agtcTTCCAG CCACCGAGGA 002160 002161 AAGGGAGAAT AGAGCACCAA AGTAAAAGAA CATGGCAAAT GTATTTTCCT GTTGTTCCTA TGTTATCTTT TAATCCAA |
Predicted Small Protein
Name | NONHSAT103492_smProtein_1706:1810 |
Length | 35 |
Molecular weight | 3899.6496 |
Aromaticity | 0.0882352941176 |
Instability index | 52.2294117647 |
Isoelectric point | 10.2890014648 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0481187069423 |
Amino acid sequence | MIRHNMSFKGLPPQPPKNQVFNMLSIISYNLLVA |
Secondary structure | LEEELLLLLLLLLLLLHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |