NONHSAT103624
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT103624 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
703 nt |
Genomic location |
chr5+:126853638..126859800 |
Exon number |
2 |
Exons |
126853638..126853691,126859152..126859800 |
Genome context |
|
Sequence |
000001 AGGCTCAGCT GTGGCGGCGT GCGGGGTGCA GCAGGCAGGA GTGCACATCG CAAGTATACC ATAATTGAAG AAAAATGATG 000080
000081 GAAGAGAGTG GAATAGAGAC AACACCACCT GGGACTCCTC CACCAAATCC TGCAGGGCTG GCTGCTACTG CTATGTCTTC 000160 000161 TACCCCTGTT CCATTAGGTA CATGTAGTTG TCTAACATCT CGTGTGTTTT GAGAATAGTG AAGATACTAT CATCTTTTCT 000240 000241 CAGAGTCAAT TAAGAAAAGA ATGCATATAT TAAAACTTCT CTATTATTTT TCAGGATGAA AGGAAATAGC CTTTTTAATT 000320 000321 TAAAGAATAG AAAGAAAGTC TTGTGTATTT AAAGTAAGAA AACATCAGTG TTTTGCTTTA GGTGGACTTT TGTTCTTTAT 000400 000401 GTTCATAATT TTACCATCAT TTATATTATG GCAGAAATAT CCTAAAAAGC ATGTGTTAGC TTTGTCTTCT Gttctttttc 000480 000481 ttttttttga gacggagttt cacttgtcac ccaggctgga gtgcagtggt gcgatctcat ctcactgcaa cctccgcctc 000560 000561 ccaggttcaa gtgattctcc tgcctcagcc tcccaagtag ctgcaattac agcactcacc accatgctca gctaattttt 000640 000641 gtatttttag tagaaatggg atttcacaat tttggccagg ctggtctcaa actcctgacc tca |
Predicted Small Protein
Name | NONHSAT103624_smProtein_398:634 |
Length | 79 |
Molecular weight | 8554.9322 |
Aromaticity | 0.102564102564 |
Instability index | 60.4679487179 |
Isoelectric point | 7.85662841797 |
Runs | 12 |
Runs residual | 0.0201688555347 |
Runs probability | 0.0373461696991 |
Amino acid sequence | MFIILPSFILWQKYPKKHVLALSSVLFLFFETEFHLSPRLECSGAISSHCNLRLPGSSDS PASASQVAAITALTTMLS |
Secondary structure | LEEEELLHHHHHLLLLHHHHHHHHHHHHHEEEEEELLLLLLLLLLHHHLLLLLLLLLLLL LLLHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |