NONHSAT103649
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT103649 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1363 nt |
Genomic location |
chr5-:127338041..127339371 |
Exon number |
1 |
Exons |
127338041..127339371 |
Genome context |
|
Sequence |
000001 GATGCAATTT TCAGATAAAA TAGGCCTATT CTAATGGTAA TGTAAAAGTT ACACTTATAC TTTCTGTCAC TGCTCATACC 000080
000081 TGTAAATCCC ATGGGGGGAA AGTCATGATT TCCTTTAGAC ATAACAGTCG TAGCCCACAA ATAAGCCGCC ATGAAATAGT 000160 000161 CAAGCAACAG GCCTCCAGTA GCTGCAGCTG GAGAAAACAC TGGATAAGGT GATCCAATTT CTGCACAAGA TCTAGTCTCT 000240 000241 CCTCCATAGT AGCGTTTAGC CTGGAAGTCA GTCATTCTCA TACTGTCAAA AGCCAGGGTC CCAGAAAAGG GAATCTTTAC 000320 000321 AGAAGCAAAT ATTTTATGGA GGACTTGAGA GAGTGTCTCT CAATGTTTAA GTATCTATTC CATAGCAAAT TAGGAACAAC 000400 000401 AATAGCTAGA GTTATAAATA CAATTCATTA TGTGTATTTT GAAATTGAAT TTTGAGCGAT TAGCATAAAA ATACTGAATA 000480 000481 TGCATTGCAA ATTAGCATGC CAACCTTGCT AAATGAAATA ACAGCCCTGA CACGTACTTA AGTAGAAAGT GGAACTACAC 000560 000561 AAAAATGGAG GAATATCAGT AGATAACATG TAAACCAGGA CGATGAAAAA AGAGGACACA AGTAAGATCA CTGCGGGTAT 000640 000641 ATTATTCTTA GCTACATATA GCTAACTGAG TCACCATTTT CTAAGGAGGA AAAATTAGAA GGAGTGCTGA AAGGGAATAA 000720 000721 CTCCAGACTG TTAATTACTT ACAGTGAATA TATGTTTGCA TATATTTGCT TAAAGTAGCT GTTAAGGAAG CTCTATTTAA 000800 000801 TTTATTTGTC AGTGTGGGCT GAGTCATCAA CAACTATACT TTTCACTTTT TTCATAGAAT CCAGGACAAG AAGAATCTTT 000880 000881 CAAGTGTTGC TAACCAGAAC TGAGCAGATC CAAGTAGCAA TCGTAGCCTA GCCATTAGTC CATGTATGGA GAGACCAGAG 000960 000961 AGGGCATCCC CACGTGGTGA TGCCTCAAGC TTCAGGAGCA CTCGACCAGA GTCAGTGTAG CCCTTGGCAG CTGGTGAAGC 001040 001041 ACAACCTGGG ACAAATGGAA GCTTTAGCAA TGAGCCGATA GGTCAAGGCT AACCAGAAAG AATGCAGCTG GGTAATGCAA 001120 001121 GCTATCCTAT CTTGTAATTA AAAGGGTTTT CTGTGCGGTT ACCTGACGTA GTTACTAAAT GGCTTGCATG AAATAACATG 001200 001201 CAGCATTCTG CAGTTACTGT GCAATTACCT TATATCATCA CCCTACAGTC AAAAGACAAA AAGAAAATTC AGGGTGAAGC 001280 001281 TTTTAACCGC AATTTGTAGC AAAGATGTTT GGAATAAAAA CACATTGCTT GCAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001360 001361 AAA |
Predicted Small Protein
Name | NONHSAT103649_smProtein_335:454 |
Length | 40 |
Molecular weight | 4759.5239 |
Aromaticity | 0.179487179487 |
Instability index | 54.1435897436 |
Isoelectric point | 6.00543212891 |
Runs | 6 |
Runs residual | 0.0148944193062 |
Runs probability | 0.0425572631454 |
Amino acid sequence | MEDLRECLSMFKYLFHSKLGTTIARVINTIHYVYFEIEF |
Secondary structure | LLHHHHHHHHHHHHHHLLLHHHHHHHHHHEEEEEEEEEL |
PRMN | - |
PiMo | - |