NONHSAT103713
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103713 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
977 nt |
Genomic location |
chr5+:131339285..131342715 |
Exon number |
2 |
Exons |
131339285..131339504,131342013..131342715 |
Genome context |
|
Sequence |
000001 TCCTGGCCAG GCTGGGGCTG TTCTCACCAG AAAACAAAAA TGTCTTTCAG ACCAAAGCAA AACGAGGCCC CAGCTGGCCC 000080
000081 AGGCAGGCCA TTGGGCGTTG TTCACACTGA CCCACTATGA ACACCAATCA CTGGGGCTCT CACTTTGCAC CCACTGGAAG 000160 000161 GAACCCATCA TCTTTGGAGA CGGAACTGGA GGCCTCGGTG GCTGCTGAGG AAAGCACTAC GCCCCAAGAT TCACATGAAT 000240 000241 TAGGAGCTAC ACAAAGGAAG TAGGCCCAGG AATAACCACA CCTACCACGG ATCTCCCGAG GCAGCTGAGC AAATGATGAG 000320 000321 GAACCACCCC TGGGCATCCT GAAGGACAAC CCCAAGGGCT CAAAGCAGCA TCTCATCCAC AGCACTCCCC TAACCCCACC 000400 000401 AATCTGTGGA CCCAGTGGAT GGTTAGTGGG AACTCTGGCG AGGCCAACGC AAGGAATGGG AGCATCACAC CAGACCATCC 000480 000481 AGTGAGGTGA GGACCTTGAC TGGGAATTCC TCTCATCTAT GCTTGGCAGA GTGGCCCAAG CTCCCAATCT GTCAGGTGAC 000560 000561 TGGAACCTTG GAGCTCTAAG GAAGCAGCAG CCCTCAGAGA AGACTCTCTT CCACAAAACT GGTCACCCAG AAGCTGTGGG 000640 000641 TTCACTAGTT GATTCATTCA TTCATTCAAC AAACACTTCT GGAGCACCTC CTTCTATTCC AGGCTGCACT GGTTCTCAGC 000720 000721 ACACAGGGTT CTCCAGTGAA GGGTAACCTG GCCCTGCCTG CAAGGAGTTT ACACCTGCTT TTCCCTACTG CTTCTAACAT 000800 000801 ATTGGCATCA TCCCCCACCT GGGCACAGAG CCTAGCATCC TAGCAGGAGC ACACTCAAAA TCTGTTGTTT ACTGATTGAC 000880 000881 TTGTGGTAAG GAAACAGCTT ATAAAACACC TTATTAAAAT AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 000960 000961 AAAAAAAAAA AAAAAAA |
Predicted Small Protein
Name | NONHSAT103713_smProtein_518:745 |
Length | 76 |
Molecular weight | 7786.5163 |
Aromaticity | 0.0533333333333 |
Instability index | 45.8093333333 |
Isoelectric point | 6.89349365234 |
Runs | 11 |
Runs residual | 0.0022695035461 |
Runs probability | 0.0433909845675 |
Amino acid sequence | MLGRVAQAPNLSGDWNLGALRKQQPSEKTLFHKTGHPEAVGSLVDSFIHSTNTSGAPPSI PGCTGSQHTGFSSEG |
Secondary structure | LLLEEELLLLLLLLLLHHHHHLLLLLLLEEEELLLLLLEEEEEELLEEELLLLLLLLLLL LLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |