NONHSAT103786
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103786 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
935 nt |
Genomic location |
chr5+:132209136..132210390 |
Exon number |
2 |
Exons |
132209136..132209781,132210102..132210390 |
Genome context |
|
Sequence |
000001 GGGCGAAAGG GTCCATGCCA GCAACACAAT CACTCAAAGT CCAGATGAGG GATCAGTAAA TACAACGTGC CTGAAAGGTG 000080
000081 GCCCTTGAGC ACATTCCTCC GGTAGACATT AACTTATTAA ATTGATTCTG ATTACAAATA TAAACTTTGC CCCCATCTCA 000160 000161 CCCAGTAACA ATGCAAGAGT TGATGTCAGT CTATAAAAGG AAGTAGGAAC TGTCCCTGGC TTTCAGGCTC CAACATCCTC 000240 000241 CCCCTGTCAA GATGTGGCAC CTCAAACTTT GTGCAGTCCT CATGATCTTC CTGTTGCTGT TGGGCCAGGT AAGGAGGGAA 000320 000321 GGATACTTAT GTGTGTGTGT GGAGTGTGGA GATGATAGTG GTGGTGGAAC TTGAAAGCTA GATTCAGTCC TGAGGAATGG 000400 000401 TTCCTCTGTT CTGAGTCTAC AGCATCTGCG GAATGGAATG ATCACTCTTC CAAGGTGTGC AGCAGGGTGT CAACACTTTC 000480 000481 ATATCTGAAT GTCTTTGCCC TTACAGATAG ATGGCTCCCC AATACCAGAA GTGAGTTCGG CAAAGAGAAG GCCACGGAGA 000560 000561 ATGACCCCAT TTTGGAGAGG GGTTTCCCTC AGGCCTATTG GAGCCTCCTG CCGGGATGAT TCTGAGTGTA TCACAAGGCT 000640 000641 ATGCAGAAAA AGACGCTGTT CCTTAAGTGT GGCCCAGGAA TGATGTACAT ACCAGGGAAA GAAAGGACAG CAGTCACCTC 000720 000721 CGACAATGCT CCGTTCTATG GAATATTGAT TAACTGCATT TTGGCTGGAG ACACCCAAGT GAAGCAATCT TGTATTTTTA 000800 000801 ATATTTAAAG GCAGATGTAC GCTTTAAATT GGTCTCCATT TCTTCTTAGA ATGTTGATAT ATGGATAAGC ATAACTAAAC 000880 000881 TTGTCAATTT AGAGTTTATT TTTCTATGGA TACTATTAAA TGTCTCAAAT TGAAA |
Predicted Small Protein
Name | NONHSAT103786_smProtein_488:682 |
Length | 65 |
Molecular weight | 7258.4062 |
Aromaticity | 0.03125 |
Instability index | 102.734375 |
Isoelectric point | 10.6412963867 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0452903884276 |
Amino acid sequence | MSLPLQIDGSPIPEVSSAKRRPRRMTPFWRGVSLRPIGASCRDDSECITRLCRKRRCSLS VAQE |
Secondary structure | LLLLLEELLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLHHHHHHHHHLLLEELL LLLL |
PRMN | - |
PiMo | - |