NONHSAT104036
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104036 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
618 nt |
Genomic location |
chr5+:137809433..137810050 |
Exon number |
1 |
Exons |
137809433..137810050 |
Genome context |
|
Sequence |
000001 gaaaGGCAAG GAGGAAGCTT ATCTGTGAAA AAGAAAAGCA CTATCACAAG GAATATAGGC AGATGTACAG AACTGAAATT 000080
000081 CGAATGGCGA GGATGGCAAG AAAAGCTGGC AACTTCTATG TACCTGCAGA ACCCAAATTG GCGTTTGTCA TCAGGATCAG 000160 000161 AGGCATCAAT GGTGTGAGCC CAAAGGTCTG AAAGGTGTTG CAGCTTCTTT GCCTTTGTCA AACTTCAGTG GAAACTTTGT 000240 000241 GAAGCTCAAC AGGCTTCAGT TAACATGCTG AGGATTGTAG ACCCATATAT TGCATGGGGA TACCCAAATC TGAAGTCAGT 000320 000321 AAATGAACTA ATTTACAAGC ATGGTTATGG CAAAATCAAT AAGAAGCGAA TTGCTTTGAT ACATAACACT TTGATTGCTT 000400 000401 GATCTCTTGG TAAATATGGC ATCATCTGCC TGGAGGATCT GATTCATGAG ATCTATACTG TTGGAAAATG CTTCAAAGAA 000480 000481 GCAAATAACT ACCTGTGGCC CTTCAAATTA TCTTCTCCAC GAGGCGGAAT GAAGAAAAAG ACCACCCATT TTGTAGAAGG 000560 000561 TGGAGATGCT AGCAACAGGG AGGACCAGAT CAACAGGCTT ATTAGAAGAA TGAACTAA |
Predicted Small Protein
Name | NONHSAT104036_smProtein_62:190 |
Length | 43 |
Molecular weight | 4808.7438 |
Aromaticity | 0.0952380952381 |
Instability index | 41.1383333333 |
Isoelectric point | 11.3950805664 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0483634895399 |
Amino acid sequence | MYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKV |
Secondary structure | LLLHHHHHHHHHHHHLLLELLLLLLEEEEEEEELLLLLLLLL |
PRMN | - |
PiMo | - |