NONHSAT104087
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104087 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
573 nt |
Genomic location |
chr5+:138629405..138650846 |
Exon number |
2 |
Exons |
138629405..138629494,138650364..138650846 |
Genome context |
|
Sequence |
000001 AGCGCCGTTG CTGCGGGGGA TTGTGGGAGT CTCCGCGTCC CGCTCGCTGG GAGAGAGGTA cctctccttt tccctctccc 000080
000081 tttccctAAG GAGTGGAGTC AACATATCAA TGGAGCAAGT CACAGTCGTC GATGCCAGCT TCTTCTTGAA ATGTAGGAGT 000160 000161 TTGAAATACC TTTAAAACAT CCTTATCGTG AATCAGAATC AGCCATTATT GGTTTTTGGG AGTTCATCAT TTACTTGTAA 000240 000241 TATCCACAAT GTTAATATCA CATAGTGGTA CTGTATGGAC AATACTATTT ACAAGTAAAA TGTTTAGATC TGGAAATTTC 000320 000321 ATATTGAATA TTAGATGCAG TAATAATATT TTGTTATTTA ACATTTCTAG GATACATATA TATTGGTCAT TATACAAATT 000400 000401 GGTGATTTTT ACTAGACATA GTGAAAGATA GTATTTGATA TGTAGAGTGG ATTAAACAGT AGCATTTTTA ATAATACATG 000480 000481 CTCTAAAAAT GTAAAAGATA CGGAAAAGAG GGTAGGTTAT TAAAAGATTC TAATTCATTG TCCAGCAAAA TCCTTGGTGA 000560 000561 TGAATTTTTT TTT |
Predicted Small Protein
Name | NONHSAT104087_smProtein_248:430 |
Length | 61 |
Molecular weight | 7190.4236 |
Aromaticity | 0.15 |
Instability index | 62.2166666667 |
Isoelectric point | 10.9533081055 |
Runs | 14 |
Runs residual | 0.0835992907801 |
Runs probability | 0.0303265450324 |
Amino acid sequence | MLISHSGTVWTILFTSKMFRSGNFILNIRCSNNILLFNISRIHIYWSLYKLVIFTRHSER |
Secondary structure | LEEELLLEEEEEEEELLLLLLLLEEEEEELLLLEEEEELLLLEEEHHHHLEEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |