NONHSAT104187

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104187

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2230 nt

Genomic location

chr5-:139778780..139781009

Exon number

1

Exons

139778780..139781009

Genome context

Sequence
000001 CGGGAAAGGG CCGGGAAATT TCCACTTCTG AATAAAATGA CTGCTGAAGT GATGACCCGC AAGAATTGGT CAAATTTGGA 000080
000081 GTAGACTTCA CCCTGCGCTT GGTGAAACTT CTACGTCAAG GATGCAAGAG GCGCCGAAGT AACGCAGCTC CCACCTGTCG 000160
000161 CTCTCCGCTG GGCGCCGAGA CTATGGCCGG AGAATAGCTG CACCGGGATT GGAGAAAGGA AGCCATCAGT CTTAGGAAGG 000240
000241 CTCCACCTTC CTGCCATTGC CTGGTTGGAG GAGCGTAGCG TCAGTCACTA GAGCAGTCAC CACCTCTGGG ACAGGTGAAG 000320
000321 ATGTGTAACC TATTTGCCGG GGGCTATTTG GGAGGGAATA GAGGACGGGG AGCGATGAGG GGACAGTCGA GGGGCAAGGC 000400
000401 CGATCTCGCT TCGCGCCTCC CGCCTTTCTG AGTTGAGCCT AGCGCGCGGG TCTGAGGGAC ATCCGGGGAG CTGCTTGGGA 000480
000481 TGGCCGCCTT GGGGAGACTC GACCCGCCCG CCAGGACCCG GCCGCGCGCC GCAGTTCGGG CGCCTTCGGG CAGGATCGCC 000560
000561 CAGCGGGGCC GCGTTCTCCT GCTTGCGGAC GGCTGCGGGC CTGAGGGCTG GACAGCGCCA TGCCTCAGTA CCGGGAACTG 000640
000641 TCCCACGTAG GAAGGTGGGA ATGCCGCGAA CGGCGTGCGG AATCCGACCT CAAGGTGGAA CGGGgtggtg aagagtgcat 000720
000721 gctccgaggc agtttcgagt tctggtgctg ccacttactt gctgcctgac ttcggcgcgt ttgctgtttc atttttgtga 000800
000801 ctttcaactc gctcctctgt gaaatgggag taatattagt accttcctca ttgggttgtt gttatgaata aattagatga 000880
000881 taatatagcg cttagcaaag tcccaaactt acaggaaaga ctcatttttg ctagttattg tCTCCTCTTC CTTCAGGAAC 000960
000961 TCTCTGCTCG CCCCTGGGTC CTGCCAGCCC AACTAATTCT AGTTCTAATC AGATCTGTGT GGTGCAAAAC AAGGCTAGCT 001040
001041 GTGGTGGTCT TCCCTCCTCT AAGGAGATCT CTTCCTCCCT ATATGCATCT CTCTATCTCT GTCTTTATCT TGTCAGTAAA 001120
001121 GAGGGGGGTT AAAAATATTC AGATTCTATA Gcgggcgccg tggctcacgc ctgtaatccc aacactatgg gatgttgagg 001200
001201 cgggcggatc atttgaaccc agtagttcga gcccagccta ggcaacatgg tgaaatcccg tctttaccaa aaatacaaaa 001280
001281 attgggctcg gcgcggtgac tcacgcctgt taatcccagc actttgggag gcctaggtgg gcggatcatt tgaggttagg 001360
001361 agttctagac cagcctggcc aacatggcga aaccccgtct atactaaaaa tacaaaaatt agccagatgt gatggtgcgt 001440
001441 gcctgtaatc ccagctactc gggaggctga ggcaggagaa tcacttgaac ccaggaggcg aagtttgcag tgagccaaga 001520
001521 tcgtgccact gcactccagg ttaggcgaca gagcaacaca tcgtctcaaa aaaaaaaaaa aaattagccg agcatggtgg 001600
001601 tgcatgcctg taattccagc tactcaggag gctgaggtgg gagggatccc ctgagcctgg gagatggagg ttgcagtgag 001680
001681 ccgagatcgt gccactgaac tccagcctga gcaacagagc ggtgccctgt ctaaaaaaat taaaaaaata aaaaaaaaaC 001760
001761 GGTTTCTATC TAATCCTTTA ATCAGACATG ACCAAAAAAG GAGTCTGGTG GTTTGTATGG AAAATATCCT TTGACCCAGA 001840
001841 GAATGTCCAT ATGATAACAG AATTTGGCTG AAAAAAAAAA AAATggccgg gcgcagtggc tcacacctgt aatcccagca 001920
001921 ccttgggagg cagaggtgag cggatcacga ggtcaggaga tggagaccat cctggccaac atggtgaaac cccgtctcta 002000
002001 ctaaaaatac aaaaattagc caagtgtggc ggcgcgtgcc tgtaatccca gctactcggg tggctgaggc aagagaatcg 002080
002081 cttgaaccca ggaggcggag gttgcagtga gccgagatcg caccactgca ctgcagcctg gcgacagagc aagactcagt 002160
002161 ctcaaaaaaa aaaaaaaaaa GTCATTTTCT CCTCTCTTAC AACTTTAACA AAGGCCTTTA TATATCTCAA
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Predicted Small Protein

Name NONHSAT104187_smProtein_863:1150
Length 96
Molecular weight 10926.1623
Aromaticity 0.0842105263158
Instability index 83.7936842105
Isoelectric point 10.373840332
Runs 13
Runs residual 0.00779113137174
Runs probability 0.0716440422324
Amino acid sequence MNKLDDNIALSKVPNLQERLIFASYCLLFLQELSARPWVLPAQLILVLIRSVWCKTRLAV
VVFPPLRRSLPPYMHLSISVFILSVKRGVKNIQIL
Secondary structure LLLLLLLHHHLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHLLEEE
EELLLLLLLLLLLEEEEEEEEEEEEELLLLLEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHL
LLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTo
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