NONHSAT104197

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104197

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1802 nt

Genomic location

chr5-:139930119..139937031

Exon number

3

Exons

139930119..139930496,139930646..139931769,139936732..139937031

Genome context

Sequence
000001 GAGCTGTACG TGAAGCCGGG TGAGCGCAGC CGGCGGGCTA GGGCACTAGG TTGTCGCCCC GGCCTAGGCT GGGGGCGGTT 000080
000081 GCGGCGCTTA GTATGGACCC TCTGTCTCCC CCAGCCCCAG TATAAGCTAA CAGTGGAGTT CCGGGCTCGC TTCACACATC 000160
000161 CCTCGCCTCC GCAGGCAACA AGGAACGCGG CTGGAACGAC CCGCCGCAGT TCTCATACGG GCTGCAGACC CAGGCCGGCG 000240
000241 GACCCAGGCG CTCGCTGCTT ACCAAGAGGG TCGCCGCACC CCAGGATGGA TCCCCCAGAG TCCCCGCATC AGAGACTTCT 000320
000321 CCTGGGCCTC CCCCAATGGG GCCTCCACCT CCTTCAAGTA AGGCTCCCAG GTCCCCACCT GTGGGGAGTG GTCCTGCCTC 000400
000401 TGGCGTGGAG CCCACAAGTT TCCCAGTCGA GTCTGAGGCT GTGATGGAGG ATGTGCTGAG ACCTTTGGAA CAGGCATTGG 000480
000481 AAGACTGCCG TGGCCACACA AGGGTAAGCT CTGGCACATC AGAGGTTAGA GAGGGCTCCC ATCCACAGCC AAATGCAGGA 000560
000561 ATGGTTCCCA GAGATAGACC CTCTGACCCA GTGGACAggt tcttaatcct ttgagagtta cggactcctt cagaatctgc 000640
000641 taaggccttc ccaaagaaat gaacacaGGA TTTCAGGAGC ATTAATAAGA CTTTTGAAGA CCAATCAGTA GAAGATGCTG 000720
000721 TGGGAACAAG AGTTGAATTC AGCTCCTATT AGTGAACAAC CTGATTTTCT GTATCTCCAT GCCATTCAGA GCAGAAGCTG 000800
000801 CTGATTTTAT TCTCAGGAAA TTTATATTGT GCCCAGTTAG GGAGAAAGAA ACCTCTTCTA GCTATAGTGT TTTCTTAGTT 000880
000881 CTTAGAAAAA GAGATCTGAA GAATGTCTTA AAAGAAAGGG AAAGTAGCAT GGTCATTTCA CCTCTTTGGC GCTTAGTTTT 000960
000961 CTTTTTGTGA AGTAACGCTA CAGGATGAGC TTCTGAGAGT CTGAGAAGCC CCTGAAATTT TAGAATTCTA GTCATAGTAG 001040
001041 Gaggtgggtt aggaagactg gtggtgggaa gatgagagaa ttcctgttta atgacctcta cttttcaatg aaacatcagg 001120
001121 cagtgtcaga agaagacagc agggaaagga aggTTTCATC AGTTTCTCAG TGGGGCCTCT AATCTTTGGG TAAAGAACCA 001200
001201 GAATTCTAAA GTGTGGGCCA GAGAAAGCAG GTGCTTCCTA TGTGGTGCTG TCTTCCCCTC TCCTCCCCTC ATTGGGCTGG 001280
001281 CAGCACTGAA TTGGAGGGGG GCTTCTGTCT CTTAGAAGCA GGTATGTGAT GACATCAGCC GACGCCTGGC ACTGCTGCAG 001360
001361 GAACAGTGGG CTGGAGGAAA GTTGTCAATA CCTGTAAAGA AGAGAATGGC TCTACTGGTG CAAGAGCTTT CAAGCCACCG 001440
001441 GTGGGACGCA GCAGATGACA TCCACCGCTC CCTCATGGTT GACCATGTGA CTGAGGTCAG TCAGTGGATG GTAGGAGTTA 001520
001521 AAAGATTAAT TGCAGAAAAG AGGAGTCTGT TTTCAGAGGA GGCAGCCAAT GAAGAGAAAT CTGCAGCCAC AGCTGAGAAG 001600
001601 AACCATACCA TACCAGGCTT CCAGCAGGCT TCATAATCCT CGGTTCCCCA GACTCACCGG ACACCATCTC CTATGCCTTG 001680
001681 GAGACCTTCT GTCACTTGGC TCCCTTCTTA CCACCACCAA GACTGTCCCA CTGGGCCTGA CCCACCTATG AGGGAAGAAG 001760
001761 TCCCACCTGG GCCAGAGGGA GTTCATGTGT TACTCATAAC AT
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Predicted Small Protein

Name NONHSAT104197_smProtein_335:613
Length 93
Molecular weight 9724.7473
Aromaticity 0.0217391304348
Instability index 69.247826087
Isoelectric point 5.02117919922
Runs 11
Runs residual 0.0156396621833
Runs probability 0.033386327504
Amino acid sequence MGPPPPSSKAPRSPPVGSGPASGVEPTSFPVESEAVMEDVLRPLEQALEDCRGHTRVSSG
TSEVREGSHPQPNAGMVPRDRPSDPVDRFLIL
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLHHHHHHHHHLLLEEELLL
LEEEEELLLLLLLLLLLLLLLLLLLLLLEEEL
PRMN -
PiMo -