NONHSAT104254
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104254 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
493 nt |
Genomic location |
chr5+:140706072..140707696 |
Exon number |
2 |
Exons |
140706072..140706204,140707337..140707696 |
Genome context |
|
Sequence |
000001 CCTGAGATCT TTATTCTACT AGGTCTTTAT TCTACGTAGC CGATACGCTG TAAAATTCTG GAAGAGAAGG CTAGGGGTTT 000080
000081 AAGGTTGGTA ATCTCTCAGA AGATCTGCGT CTCGGTGACG GAAAGAACTA AGGATACTCA CAGATGGAAT TCTAAACTGG 000160 000161 TAGCAGACCC TGAAGGACAA TGTCACCATC AGAACCACCA ACAAGGACAA ACTGTCCCTC TCCTGCATCA CCCTGCATAC 000240 000241 CATCTGCATC CACAAAAATG CTCATTCTTC AACAAGCCTC CTATTTCTTT TGGGTGACTG GGAACACTGC CCAGCACCTC 000320 000321 CATCACATGC TTTAGCGCTT CCCACCCTAA CTTAGGGTCC CATATGCCTC CTGTTTCTTC TTGACCAGTG ACCTGCCACT 000400 000401 GTGGGCACTG TCATTCTACA TGTCAGTGAG TGCAGAGTGC TATGGTTACC ATGCAGACTA TCTTTGAGCT GACTCTGCAG 000480 000481 GCCAGTGACC AGG |
Predicted Small Protein
Name | NONHSAT104254_smProtein_179:334 |
Length | 52 |
Molecular weight | 5613.409 |
Aromaticity | 0.078431372549 |
Instability index | 80.937254902 |
Isoelectric point | 7.87701416016 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.044931486108 |
Amino acid sequence | MSPSEPPTRTNCPSPASPCIPSASTKMLILQQASYFFWVTGNTAQHLHHML |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLEEEELLLHHHHHHHLL |
PRMN | - |
PiMo | - |