NONHSAT104263
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT104263 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
782 nt |
Genomic location |
chr5-:141005317..141008825 |
Exon number |
5 |
Exons |
141005317..141005331,141005761..141005850,141007460..141007524,141007681..141008206,141008740..141008825 |
Genome context |
|
Sequence |
000001 CGGGGTTCAA GAAGCTTTCT ACCTCACTGA CCGGGTCATG ACGGTGTCCT TCCACAAATA CGGAAATTAC TTCTTCCCTG 000080
000081 GCACAGGTGA CATGTATGAA GTCGGGGCAG AGAGTGGCCG CTACTACTGT CTGAACGTGC CCCTGCGGGA TGGCATTGAT 000160 000161 GACCAGAGTA AGTACCGAAG TCTTCCCTCT GTTCCCTAGG CCCCTTCTTT TTCTCCTTGA AATAACCTCT TCTGCCTGGT 000240 000241 ATTGTCTGCT GTTGGGCCAG TTGTCCTTAA GGatgaatgg ccttcagagg gaccatgaat ctctggaaat tgtatgcaac 000320 000321 atatcatgtg tatgtgcatt tttctgggaa aagtcattgg ctttcatcag tcactcatag cagtctggga tcccTTCCAG 000400 000401 AAGTTTCAGA CCAGTGATTT GATTCTTTTG GGTGGCCCCT TTCCTGGGCT ACATGCTCGC TCAACCCCCT TTTTCCTTTT 000480 000481 GTTCCCTGTC TCCCCATCCC CTTGGGGTGC CAGGTGCCCA TCTTTGGCCC TCTCCCAGGT TACAAGCACC TTTTCCAGCC 000560 000561 GGTTATCAAC CAGGTAGTGG ACTTCTACCA ACCCACGTGC ATTGTGCTCC AGTGTGGAGC TGACTCTCTG GGCTGTGATC 000640 000641 GATTGGGCTG CTTTAACCTC AGCATCCGAG GGCATGGGGA ATGCGTTGAA TATGTCAAGA GCTTCAATAT CCCTCTACTC 000720 000721 GTGCTGGGTG GTGGTGGTTA TACTGTCCGA AATGTTGCCC GCTGCTGAAT ACTTCGAGTA CT |
Predicted Small Protein
Name | NONHSAT104263_smProtein_149:379 |
Length | 77 |
Molecular weight | 8725.2534 |
Aromaticity | 0.118421052632 |
Instability index | 45.7368421053 |
Isoelectric point | 6.01983642578 |
Runs | 10 |
Runs residual | 0.00983061101028 |
Runs probability | 0.0327415650946 |
Amino acid sequence | MALMTRVSTEVFPLFPRPLLFLLEITSSAWYCLLLGQLSLRMNGLQRDHESLEIVCNISC VCAFFWEKSLAFISHS |
Secondary structure | LLLEEELLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHEEEEELLH HHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLHHHHHH HHHHHHHHHHHHLLLL |
PiMo | ooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiTTTTTT TTTTTTTTTTTToooo |