NONHSAT104280
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104280 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
706 nt |
Genomic location |
chr5+:141254324..141255029 |
Exon number |
1 |
Exons |
141254324..141255029 |
Genome context |
|
Sequence |
000001 ACTCCCCACC CTCACCCCAG CACTGTTACA CAACGGTCAC TGCCGCGGGC ACAAAACACC AAGGGACAAA CGGACTGTCG 000080
000081 CGGGGAGAGG GGAAGAAAAT GGGGTTGCGT GGGGTGGAGC TGAACAGAAG CCTCCCACAG AGAGCAAGTG TGCAGACCTC 000160 000161 AGCTCCTCTC CCCTCTCTCC CACAACCCTC TATTAGCCTC TGCAGGGCTT CTGGGCACCT GCATGTCAGA TCGTTGGGGT 000240 000241 TAGAACCCTC GCTCCACCAC TTCCTAGCTG TGTGACATTA ACCAAGTGAA TTTACTTTTC TGAACCTGTT TCCATACTGT 000320 000321 GAAATGGAAA TAATGAAACC TGCCTCTTGA AATTATTTGG GAGAATTAAA TGAGATCTCA TGCCTATAAG GTCTATTACA 000400 000401 TTAAGGTCTA TTTACATTAC ATGTAAAGGA CAAATCATTT TTTTTTCTAA GTCTTCTAAT TGCTGAATAG ACCATTTTAT 000480 000481 TTCCAGCATC GGGCACACAG TGGGTGCTCC TTGGTTCGAT GAATAAACAA GCCAATCCCC TCGCTGGTTG GTAAGTCCTA 000560 000561 TGAAGGCAAT GATGGTATGT CTCTTACTAC TGCATCCTCA CCACCCACCA TGGACCCTGG CAGATAAAAG GTGCTCAATA 000640 000641 CATTGTTGAA CAGAATCTCT GCACCAACTA TCCTTGCTCA CGGCAGGGGC AGCCCTCACC TTCTTC |
Predicted Small Protein
Name | NONHSAT104280_smProtein_98:274 |
Length | 59 |
Molecular weight | 6220.1547 |
Aromaticity | 0.0172413793103 |
Instability index | 61.575862069 |
Isoelectric point | 11.4000854492 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0326395914631 |
Amino acid sequence | MGLRGVELNRSLPQRASVQTSAPLPSLPQPSISLCRASGHLHVRSLGLEPSLHHFLAV |
Secondary structure | LLLLEEEELLLLLLLLEELLLLLLLLLLLLLLLEEELLLLEEEELLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |