NONHSAT104307

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104307

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3557 nt

Genomic location

chr5+:141724981..141871683

Exon number

12

Exons

141724981..141725050,141732791..141733186,141755167..141755458,141762162..141762630,141783766..141783918,141791135..141791666,141825319..141825816,141843535..141843624,141857245..141857689,141866182..141866328,141866338..141866354,141871235..141871683

Genome context

Sequence
000001 GAAGCTAGTA GAAGATTTGT ACCAACAAAA CCAAGGAGTA AACAACTTGA GAATAACTGC ATGAGCTCAG GGCTTGGACT 000080
000081 GTCAGATTCC ATTTCTAAGC TTCCAGAAGA GCGACACATA GACACTGGGG AAGTCAGAGC CTTTGAACTC CAATGCCATC 000160
000161 CCCGTCACCC ACCTCCACCA CCAGCACCAC CACCGAATGG CACTTTGGAC AATTTTTCCC TCTCATGTGA CTTTTGTCAT 000240
000241 TTCTTACGTC AGTTGGAGCC AGCACCTCTC AAATCCATCT TCTAAAACCC AGAAAATTGT GTGTAACACA TGATGACTGA 000320
000321 AAGGGAGTAG GCTGACCAGT TAAGAGCCTG CCACTGGAAT GGAAGGCTGT GGGAAGGTGA GGGGACGGTG GACATCAACC 000400
000401 GGGAAGAGCT GAAAGATGGC GTTACCAGGT ATCTACCCTG CTACCCTGCA TAGAATTCCC AAGACCGTCC ATTGGATTCG 000480
000481 AAGGGGTCCT CACACGAAGC AGGAAGTCAC CCTGTATCTC AGAACTGTGG AGATCTCAGT CCGTGGTCAT CTTGTCATAC 000560
000561 ATGACATGGC AGGAGCCATG GTCCAGGGAA CCAGGTGGCT GCCAACTTGC AGAACAGGCG ACAAAACCCC AGCCTGGACC 000640
000641 CCCAGACCAT GCACTTCTCC CTTTGCCCTG CTTCTCCTCT GCCTGGTACA GGTTTCCAGC CAAGCTCTGC ACCGGCTTCT 000720
000721 ATGTCTGTTT GTTTTCCTTA GAAGCTTCCT ATAGAAAGCC TGGAGGAGCA ACTGTGAGGC CCCGAGATGG GGAGGGAGCC 000800
000801 CAGATTCTGG CTTTTGGTCT TCCTGCTGTT TCTTTTGTCT GATGCTGGTG CATTTCCATG GACAGTTTAT TTCCCTTGGA 000880
000881 CACTGTGGGC TTGGTTTTTC CATGAGTGTG TGACGCTGTG GTCATTCACC AGGCCCTGTT GGTGGTCTCG GTGGGGGCCA 000960
000961 CAAGGCTCAG ATCTCACCTG CCCCTTTTCC TACCTCCTCC ACTCTTTGCT CAGCCATCAA CATTCCTTTC TGTCCCAGAA 001040
001041 GTGTTCTTTC CAAAATGCAG ATCTGCCCAT GTCCCCTAAT GACGTCACTT ATTGACTTCG CTATGGAAAA GGAGCGATGG 001120
001121 GGAATGTGGC CGGAAGGACA GCAGAGAGCC AGACTGTGGA GACCTTTGAA TTCCAGAGGA ACAAAAGTAT TTTGGGTGGC 001200
001201 TCACACCTGT AATCCCAGCA CTTTGGGGCT TTTTTGCTGG TAGACGCACA CCATCACATC CTACATAATA TTTAGCTCTG 001280
001281 AGGCGTTTCC AGATGGGAAG TGCGTTTCTG TATTTTCATA GCCGTGTTCT CTACGTGAAT GGACTGGCGT GAAGCTGGGG 001360
001361 GCTGACGGCT GGCAGGGCAG AGTAGAGATG GGGGTTTTCA TCATGTTGGT CAGGCTGGTC TCGAACTCCT GACCTCAGGA 001440
001441 GATCTGCCTG CCTTGGTCAT CCAAAGTGCT GAGATTACAG GTGTGAGCCA CCATGCCTGG CCTAAAATTT TTCTTTAAAC 001520
001521 ACTTAAAATA CGTCACACTA TGATAATCTA ACTTTTCTGT TCTTTGTTGT GAAGTATACA GGAGCCTCTA AGTGGAAGTG 001600
001601 GCTCAGGGCT CTCTCCTGGC CTTTGAGAGG TTAACACTAT TATTTGCTCC ATTCAACCAG CAAGGGATTG GAGGTCTAGG 001680
001681 GAGGCTGTCA CTTGCACAAG GTCACACAGC TGTAGTAAAC TTCTGAGTTT GGACTTAGCC CCTCTGCTTC TAAAATCCCC 001760
001761 TCTCTGAACC TCATACTCTC CAGCATCTCT TCTAGTTTTT TGCTGTTCTT TGCTACTCAG GCTGAGGCCC CGAATATAAG 001840
001841 TAGATGTGTG TTAATAAGTG TCTGTGCATG CATGTACATA TACACAGACA TTTCCCCTGT CTCTAGAGTC CCCTTTCGTG 001920
001921 CCAAGTTTAA GCAGCTAACT CCTGTCAAGC ATCTAAGGGT TAGTTCAGAA ATGAGAGTGT ACAATGGCAC CAGCACCATA 002000
002001 AAAATAACTG GATGGTTGTA TTAATCTGTT CTTGGATTGC TATAAAGAAC TACCCGAGAC TTAATTTATA AAGAAAACTA 002080
002081 CCTGAGACTT AATTTATAAA GAAAACTACC TGAGACTTAA TTTATAAAGA AAAGAAGTTT AATTGCCTTA CGGTTCCACA 002160
002161 GGCTCTATAG GAAGCATGGC TAGGGAGGCC TCAGGAAACT TACAGTCATG GTGGAAGGCA AAGGGGAAGC AGGCATGTCT 002240
002241 GTCCTACATG GCTGGTGCAG GAGGAAGACA AGGGAGAGGT GCTACACATT TTTAAACAAC CAAATCTCAT GAGAACTCAC 002320
002321 TATCACAAGA ACAAGGGAAA AATCCACCCC CGTGATCCAG TCACTTCCTA CCAGGCCCCT CCTCCAACAC TGGGGATTAC 002400
002401 AATTTGACCA ACAACTTCCA GTAAAAGAAG GCACTGAGGT TTAAGTGCTA CGTGGGAGCA GTTGCCGATT TTTGCAATGG 002480
002481 GAGGCTGCAT AGATTCAAGA TTTTTAGTAG AGATGTGGTT TTGCCATGTT GGCCACACTG GTGTGGGACT CCTGACCTCA 002560
002561 AGTGATCCGC CTGCTTCAGC CTCCCAAAGT GCTGGGATTA TAGGCGTGAG TCATGGTGCC AGTGAATTTC TATTAATTTT 002640
002641 GATTATTATT TTATAAGTTT GAATATAACC AACTCACCTT TCATATATTT ATAAGTCTAA AAAAGTCAAT GGACAATGTA 002720
002721 TAATTTGGAA ATCACTTATT TCCATTTGGA GGGGGATCTC AGGGGGATAT AGTTAGCTTT GGAGAACATA AGATCATTTG 002800
002801 GTTTTAGAGG TCACCTTATC CTGATCGCAT GAAAGGAAAG GATGGAATTC AAGCTTTTTA TGACCTAAAC CCTCAATGTC 002880
002881 TGTCTCTATC CTTAGTAAGA AATGGGGAAG GGGAACAATA ACGGGAGCAT TATTGAGAGC TGTTCTCCCA CATTCACTAA 002960
002961 ACTCTACCAA CATAACTTGC TAAATAAATC TTACCTATTC TTACTTCCCC ATCCCTTACC ACCATTATTG TAGCTTGGGC 003040
003041 TGCTAGCATC TGTTGCCTGG CCCAGTAGCC TTTCAAGAGT TTTGACTGAT GAGTTGACTC TCACCATGAA TTTCCGTCAC 003120
003121 ATTTACATGT TTTAATATTT TATTTCCTTA TTTTTTTTTT TCTGATCAGT TTCCTATCCA CCATGTAAAG CGAGCATCTT 003200
003201 GTGGCCATAT TGACAGACTC AGAGTACCTG TTTCAAATGT TTGGGTCAGA TGCTGCTTTT CCCTTCAGTG CTGTGCAGCT 003280
003281 CTGGTGTGTC GGCCTCCAGC TTTTCCTGGG GTCACAGACC TCGCGACCAC CAGGTGCCCA AGGAAATCAG TCGTTGAGGC 003360
003361 GAACGGCTTC ACTTCTTGTC CCATTTGTGT GTGTGGCTGG AATTCTCTAG CCTGAATGAT TCATTTAGAC TCCATAGACC 003440
003441 ACCACCTGTA TTCACAGAGT CTCAGACCGA CTTTTAAGAT GCATTTCATT TTTGTCTCAA GGTTACATAT CTAACCAGTG 003520
003521 TGTTATAAAG GGTATTGGCC ACAGGTAGAG AATGTAT
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Predicted Small Protein

Name NONHSAT104307_smProtein_560:841
Length 94
Molecular weight 10156.553
Aromaticity 0.129032258065
Instability index 41.6355913978
Isoelectric point 7.66143798828
Runs 16
Runs residual 0.0411190760653
Runs probability 0.0285285285286
Amino acid sequence MTWQEPWSREPGGCQLAEQATKPQPGPPDHALLPLPCFSSAWYRFPAKLCTGFYVCLFSL
EASYRKPGGATVRPRDGEGAQILAFGLPAVSFV
Secondary structure LLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLLLLLEEELLHHHLLLEEEEEEEE
EEEEELLLLLEEELLLLLHHHEEEELLLLEEEL
PRMN -
PiMo -