NONHSAT104317
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104317 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
958 nt |
Genomic location |
chr5-:141974726..142077617 |
Exon number |
3 |
Exons |
141974726..141975049,141993524..141993726,142077187..142077617 |
Genome context |
|
Sequence |
000001 TAAATATACA GTGCTTGTCC TTAGCCTTTC TGTGGGCATA CCAGTGTCAG CTGCACTTGT AGGGGCCCAA GTGCCTCATG 000080
000081 ACCCACTCGG CAGCCTTCCT CTCCAGGATC CCCAAGGCTA GGAGGCCAAC CTACTAACAG GTGGGTGGGT ATGGTGTGTG 000160 000161 GTTTCACTCA GTTCTTCTCA TGGGGTTTCT CTGAGCTCCA TTCATACCAG AAAGGGAGCA GGAGAGAGAG GACAAGTGGA 000240 000241 TCCAACAGCC TTCGCTCCAG GGGAATCAGG GCATCGCCTC CTTTTCTGGG AGGACACTCC CTTCTGATGG TGAATGGGAA 000320 000321 CTCCCTTCCT CCTGCAGCAG CCTGCCTGCA GCTGTCCTGG TAGAACAGTG TGGACATTGC AGAAGCTGTC ACTGCCCCAG 000400 000401 AAAGAAAGCA CCCCAGAGCC AAGGCAAAGA GTCTTGAAAG CGCCACAAGC AGCAGCTGCT GAGCCATGGC TGAAGGGGAA 000480 000481 ATCACCACCT TCACAGCCCT GACCGAGAAG TTTAATCTGC CTCCAGGGAA TTACAAGAAG CCCAAACTCC TCTACTGTAG 000560 000561 CAACGGGGGC CACTTCCTGA GGATCCTTCC GGATGGCACA GTGGATGGGA CAAGGGACAG GAGCGACCAG CACACAGACA 000640 000641 CCAAATGAGG AATGTTTGTT CCTGGAAAGG CTGGAGGAGA ACCATTACAA CACCTATATA TCCAAGAAGC ATGCAGAGAA 000720 000721 GAATTGGTTT GTTGGCCTCA AGAAGAATGG GAGCTGCAAA CGCGGTCCTC GGACTCACTA TGGCCAGAAA GCAATCTTGT 000800 000801 TTCTCCCCCT GCCAGTCTCT TCTGATTAAA GAGATCTGTT CTGGGTGTTG ACCACTCCAG AGAAGTTTCG AGGGGTCCTC 000880 000881 ACCTGGTTGA CCCAAAAATG TTCCCTTGAC CATTGGCTGC GCTAACCCCC AGCCCACAGA GCCTGAATTT GTAAGCAA |
Predicted Small Protein
Name | NONHSAT104317_smProtein_644:850 |
Length | 69 |
Molecular weight | 7662.1195 |
Aromaticity | 0.0588235294118 |
Instability index | 72.875 |
Isoelectric point | 11.2123413086 |
Runs | 9 |
Runs residual | 0.00814785373609 |
Runs probability | 0.0473807140474 |
Amino acid sequence | MRNVCSWKGWRRTITTPIYPRSMQRRIGLLASRRMGAANAVLGLTMARKQSCFSPCQSLL IKEICSGC |
Secondary structure | LLLLLLLLLLEEELLLLLLLHHHHHHHHHHHHLLLHHHHHHHHHHHHHHLLLLLLHHHHH HHHHHLLL |
PRMN | - |
PiMo | - |