NONHSAT104346

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104346

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2825 nt

Genomic location

chr5+:142605733..142608561

Exon number

1

Exons

142605733..142608561

Genome context

Sequence
000001 ACTAACAAAA TTTCGTAGCT AAAGAATGCC ATGGCCGGGT GCAGTGGCTC GCGCCTATAG TCCCAGCACT TTGGGAGGCC 000080
000081 GAGGCGGGCG GATCACGAGG TCAGGAGATT GAGACCATCC TGGCTACGAC GGTGAAGCCC CGTCTCTGCT GAAGGTGCAG 000160
000161 AAAATTAGCC GGGTGTGGTG GCGGGCGCCT GTGGTCCCAG CTACTCTGGA GGCTGAGGCA GGAGAATGGC ATGGACCCGG 000240
000241 GGGGCGGAGA TTGCAGTGAG CCAGGATCGC GCCCCTGCAC TCCAGCCTGG GTGACAGAGC CAGACTCCGT CTCAAAGGAA 000320
000321 AAAAAAAAAA AAAAAGAATG CCATGCCAGG AGAAGACAGC TGGTTTCAAA TCCCTGCCCC CAGGCAAGTA AAACCCTGAC 000400
000401 TTGCTCAAGA CAGAAGATCT TTTCTCCTGT TTTTCAAAAT AAACATATAT AGGGATGGAC CCTGTGCATT GTGGCCTGCC 000480
000481 TTGGTGTCCT AGAATTGGAG CCAGTCTTTA GCTTAATGTC TGAAGTATTT ATACGGCCAA TATGTGTTTT CTTATGTCAG 000560
000561 ACCAAACTGT CTTTTTGAAT ATCAGTTCAT TTCCTCTCAC CGAGTGCTTT TCGGTGAGAG GCAAAGAGAA AGAATGAACA 000640
000641 ATCAAGTATT GACAGACTGG CATTAGCAGG ACAGAGCCAT ACTAGTGACA AGGGCATCCC AAGGCACTTG CCCAGAGCTG 000720
000721 CAGAGTTGTG TGTGCCATAC CTGCGGCTCA AAGGGAAGGC CTTCTATCCC CTGAGTTTCT ATCAGCTGAA AATGGCAACT 000800
000801 GCTGTCTCAG TAAAAGCTCT GTCTTGACTG CAGAGGCTCC AAAAGCATTC ACAGTTGAGG GGGAGAAAGA CAGAAAGAAG 000880
000881 AAGCCAAAGA TAACCTGATC CCTGCCTGTC TGTTGGCACC TGTCATCCTC TGGCTTCTGC TCCCAAAAGC AAGTCTGGAT 000960
000961 GACTGAGTTT TGTGGACATG GCACTCCCGG AGACAGCAGT GGCCACCATG GCACCCAGAG TTTGCCCAAG TACTGAATGT 001040
001041 TTTGTGAGCA ACCATGTTCC CCAAGTAGGT AGCCAGCGCT GCAGAAACCA AACAGCCTCT TAGCTACCTG ACTTTAAAAG 001120
001121 GAATGACCTA GGTGTTCTGC CAAAGGAGTT ATCCATCATC TCTGGCAAAC TTGACAATCA TCACTTACCT CGACAACCCT 001200
001201 GCCCCACATC ACTTTATAAA GTCAGCAGGA TGTCCTCTCA CCCACCCTGT GCTGGTGTCT AACAAATTTA TCTTGTCATG 001280
001281 CTCAACTGTG TTTGGCAGCC ACACCGATCG GCTGGGTGCT GAACCGCCTC TCTGTAATTG TAGCATCAAA ATGACAACAG 001360
001361 CAGCAGAGCA GCGAATCTTG CACAGCCCCA CAGCATGCCT GAGACAAGAC TCCAACAAGT AATAATTAGC TTTTTTTCTC 001440
001441 CTGCCGCCTA CAGTACCTGT CTAACTAAAG AGCTTCCCAA AGTGGAGGGA AAGGCCATAG AATCCAGGTG TCATTCAGAG 001520
001521 CCAGTCCTTG CTGAAATGTG GTCTTCCAGT GGAAGCACCT GTATTATTGA GAGGAAAAAG TGTTGGATGC AAAGTAACAC 001600
001601 CAGGACTAGA GAGAAAGAGA AAGGTGAACC ATCCTAAGGA GCTTTGGATA CTTTTTTAGA AGGATAAATA TTATGCTTAC 001680
001681 TGAGGAGAAA AAAAAAAGCG ATCACAGAAA AATTTCACAG CTAATATTTT TACAAAAGTT GTGCCAGACA TTACAGAGTG 001760
001761 AAAACGTCTC TCAAGGTGGA ATGCTTTAGA GAGCAAAGGC TTAGCATAGA CCTAGACCCT TGTGTGGGTA TGACATGACA 001840
001841 TGACATGTCC ATGTCAAAAT TCACTTTAGT CAGAACCAGA GTATTGATAA ACAAAATGTC AGTTACCTGG AGCAGTCCTG 001920
001921 GAGAGGTTAA GACATTCTAT ACTGTTCTAC GTCAACCATT TCTACAAAGT TGTCCAGACA CCTAAAAGCA GCTTTCTTGG 002000
002001 TTATCCAGAT GCCAGAATCA ACCTTGTATC TGACAATGCA CATCTGTTGA TTCTAAAGTA TATTTATGTG TGTGTGTATG 002080
002081 TGTGTGTATA CAGCACATAT TTACATCTAT GAAGACATAG ACACTTACAG AGACCCACAT GAGCTGGCAC TTTCTGAGCC 002160
002161 TTTACAGCCT TTAAGACTCG GAGGTTGAGA ATTAGAGACA CAAGAGAGGC TGTGGATGGC CTATTAAAAT GATTAAAGAT 002240
002241 GTAAATTCAG TGCCATTTTA AAACTGTTCA TATTTATCAA ACAATTACTG TCTACAGCTA CATTTTTTGT TAACTTACTT 002320
002321 AAAGTCATGT CGCAAGAAAG ATCAAACCCA TGAATGCTTA GTAGCTAAGG CTAGTGTTCA AGAGCACTCT AAAAGACATT 002400
002401 TTGTCCACAT TTTGGAAAAG AAAATATTTG CATGTTTAAT TCATAATTTA GGCTATCTTT GAGTATACTG TAAAGTGCTG 002480
002481 TGTGATATAA TATCAATAAA GTACTTATTA AATGGCACTT TAATGTTTTC TTTTAAAATA ACGCACTGTT CTAAACTTCA 002560
002561 GTATTGACTA TTGACTCGTG CATAGAATCC AATGCTGTAA TTAGAAAGTA ATCTGTGACT AGAATAGACC TTTGTCCCTG 002640
002641 TTAGTAGCCC TGTTGCCATG TTCAGGCTTT TAAAAAATGC TTTTGTGTCA CCAAATATAT CTATAAAGAA AACAAAATTT 002720
002721 CTGTTCAGAG GCCTCTGAAA CTTGGCTTTC TTACATGTGG TTGGTTTATG TGACAATCCC TATGAAATGA GTGGACGTAT 002800
002801 GATTTTTGAA TTAAATGACT TTTCC
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Predicted Small Protein

Name NONHSAT104346_smProtein_1394:1636
Length 81
Molecular weight 9080.3462
Aromaticity 0.0625
Instability index 77.805
Isoelectric point 8.42095947266
Runs 12
Runs residual 0.0111842105263
Runs probability 0.0438158746982
Amino acid sequence MPETRLQQVIISFFSPAAYSTCLTKELPKVEGKAIESRCHSEPVLAEMWSSSGSTCIIER
KKCWMQSNTRTREKEKGEPS
Secondary structure LLLLHHHEEEEEEELLLLLLLLLLLLLLLLLLLEEEELLLLLHHHHHHHHLLLLEEEEEE
EEEEEELLLEEELLLLLLLL
PRMN -
PiMo -