NONHSAT104350
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104350 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
602 nt |
Genomic location |
chr5-:142788555..142814339 |
Exon number |
3 |
Exons |
142788555..142788804,142813284..142813392,142814097..142814339 |
Genome context |
|
Sequence |
000001 AGGAAAGGGG CCAGCTTCTG TGACGACTGC TGCAGAGGCA GGTGCAGTTT GTGTGCCACA GATATTAACT TTGATAAGCA 000080
000081 CTTAATGAGT GCCTTCTCTG TGCGAGAATG GGGAGGAACA AAATGCAGCT CCTACCCTCC TCGGGCTTTA GTTGTACCTT 000160 000161 AATAACAGGA ATTTTCATCT GCCTGGCTCC TTTCCTCAAA GAACAAAGAA GACTTTGCTT CATTAAAGTG TCTGAGAAGG 000240 000241 Aaggtttgaa caggatccct ctggctggtg tgtgaagaat taactgtaga tgggcaagtg tggaaggaag gagagcagtc 000320 000321 aggaagctgc cataaccatc tacatgagag agAATCGTGT AACAGACACT ACTCAATATC GATCTCaact gatccagttc 000400 000401 tccagtctcc ctggaaaaca atggattgat gcccagggtg cgctgaacac tggaaccatg gtcacttctg cacttcacac 000480 000481 gattctgctc ccaccagttg agctaccaac agttcctggt gcttttgctt cccaaacatg tttatgccat ttgttgctta 000560 000561 ttactgtact tacttaattt gattaaatat taagtaaaat ga |
Predicted Small Protein
Name | NONHSAT104350_smProtein_107:274 |
Length | 56 |
Molecular weight | 6126.3545 |
Aromaticity | 0.0727272727273 |
Instability index | 62.9654545455 |
Isoelectric point | 9.74761962891 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.090642112701 |
Amino acid sequence | MGRNKMQLLPSSGFSCTLITGIFICLAPFLKEQRRLCFIKVSEKEGLNRIPLAGV |
Secondary structure | LLLLLEEELLLLLLLHHHHHHHHHHHLHHHHHHHHEEEEEEELLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiii |