NONHSAT104364

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT104364

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3000 nt

Genomic location

chr5+:143861871..143865249

Exon number

1

Exons

143861871..143865249

Genome context

Sequence
000001 AGCGGAGTGT GTGTATTTAT GTGTGTTTTG TGTTTATGTA TAAAATTATG TATATATATG TACATATGTG TGTACATCTA 000080
000081 TCTTAATGTG TATATATAAA TATATATCTA TAGCTGTACA TATGTATACA CCCATAAACA AAGCTCATAG TTTAAAACTT 000160
000161 TGGAATTTTC AGTTTGGAGA ACTTATTATT ATTACAATTT ATATTTGGTT TCCTAGACGG TCTAATATAG TTCTAATTTC 000240
000241 CAAAATTCTC TTCCACTAAA AGTGGATATA TTTATTTATG GTGCCGAGAA CATTAACAAA ATATTTAGAT TTAATATCTA 000320
000321 TGAATAATAA ACCAAAAAAA GTGCATTTAA GGAAACACCA AACTTGTAAA AACTGGCTCT CTTATCCAAA CCATTTGTTG 000400
000401 GAATTTCAAA CTACATGTTT TCACACTTCT TCATTCCAAA AAAAAAAAAA AAACCAAACC AGAAAAAACC CAAAACACTA 000480
000481 CCAAATGAAC AGTGATAATG TTTAAGAAGA AAAAGAAAAA TGTAGGTGTA TGATAGCACA AATTCAATGG TTATTGCCCT 000560
000561 AGTGGTGCTT CACTTACCTA TTGGTTAATT TATTATATCC TGGTTAATTT CACTTTATCA CTGATGAGGG TTCCTGTGTC 000640
000641 CCTACATGAT TTATCGGTGG AGCTAATTAT CTATTTATTT AAAGCTATAG TAAATAATTT ATAATATGCA TATTGTAAAT 000720
000721 AGATACTAAA AGTCATGGGC ACATTGTAAT AATCACAAAG TTTTAGTCTC CTGCAAATAA CACTTGAAGT CTGTTTATAC 000800
000801 AATACCCAAA TAGTTGCTCA AAGAAAGAAC AATGTAAGTC AAATACAAGA AAACCTTACT TACCTATTTT GGCATTTTAC 000880
000881 AGACATAACA ACCAAATTAA CGAATTTTGG CCATCTTAAG AATACAGTAA GTTGTGTACT CATTCATAGC CACATGCTTT 000960
000961 GCATATTACT GGGGAATGTG AAAAATATTT AAAGTCAACC TATGCAAACA GAGATTCCCT GCTGCTCCTT GGGATCAGTT 001040
001041 TGTATGCACA CAAGCCCATG CCTTCAACTG ATAGTCCTAG CACAGATCCC TCCTCCCAGA GATCTGTCAG GTGTGCCCAC 001120
001121 ACAACAGAAG CACTTGTAAA CTAATTAAGC ACGGTCACTG AATCCTTTTT TCACCAGCCT TCTAAAGATG TTGTCTTAAA 001200
001201 AACATAAGAA AGAAAATCCA TTTTTTTAAA GCAATGAAAT GTTCTAATTA GGTTTGAGGA CATTTGAAGG AGCGATTGTT 001280
001281 TTTTCCCCAA AATTTTGGAG CAGAGGGGAC GTTTTACATC ATCCTAACTT CATGTTCCTC TGTCATTTTA TTTTATTTAT 001360
001361 TTATTTTTAA TTCCAAAGGA GAAAGTTGAA TCAGGAAAAT TTGTCTTAAA ATATACTGCT TAGTTTAGAG ATGGACAAAC 001440
001441 TAATGTATTT TTGTAAATCA TGGGTGGCGG ATGTCAAAAT CTCTCATTAA TTACCCTGTT TTTTTCTTTA AGGAAATTGA 001520
001521 TTCATGAATA ATTGGAAAGG TATTCTAGTT AAGACACACA GAAACACAAA CTTAGCGGAG CTGCACTTCA GAGAGTCCCA 001600
001601 CTGTAATCTG TTAATAGAAT CTGCTTTAAA TGAGTCACTC CTTAGACTGG CAATGACACC CAGCTTAGTC TGTAAAATCA 001680
001681 GGAATCTTTG TGTTGGCTGA AGGAACTTAG TAATCTTAGT TGAATTCCTC TTCCCCATGT CTTTCAAAAC CAGAGCACTG 001760
001761 GGTCGAACCT AACCCACAAA ATAATTCGTC CAAATTAAAT TGACTTTTTT ACATAACATC AGCACCACCC CTTACACTTT 001840
001841 TAAAGTCAAA GACCCTGTTG ATCAGGTTAC CTGGAAATTT CAAGTGCATC TGACCAGGGA TTATCAAGCT CCTTGTGACA 001920
001921 TCTGTTTCTG ATGCTGTGAA TGTGATGTCA CCACAAATAG AGGATTCTGA ATTTTGCTGG TACTAATGCT GAGTGGTGAC 002000
002001 TTATTGGGGC GTTGCTCATG TTACTTTTTC CTGACGTCAT TCAAGCACTT GATGACTTGG GTCAGTTTGT TGCACATTGA 002080
002081 TGAATAACAA GTGACACCCA ATGAAATTAC CTCTTCTCCT TTCCAATGCA GTTCGCTTGT ACATAAATGT AACGTCAAAT 002160
002161 TGTTTACAGG TTATTTTTGT GCGTAATTGT GATAGCAGAT TTAGCTCAAA CTTTAAAGGA ATTTGTTTAC TGACTGGTGT 002240
002241 TAAAATGAAT GTGCTTATTA CAGTATAAAC ATCATTAATT ATGGACTCAC ATGAATGCAT GTCTACATGT CGTCAGTTCT 002320
002321 CAGCAGCTCA GTTATTCAGC AAAAAGTCTG CAGTCTGTGA ATAGCAAATA TACATAAACT ACTGTGACTC TAATAACTCT 002400
002401 AACTGTTTTT ACCTTGGGAT GTAACACTGT AGATCTTCGC CTGCTGTATT TCTTTCTTAC CTATTTGTTT TTGCGAGAAA 002480
002481 AACATGATAG AAAATGCTAC TACTAATTGT CCCAATGGAA TTGCACATCA TTTTGGCAAT CATTGGTTCA CTCAGAAGGC 002560
002561 AACCGCCTAT AGATGGAACA GCCCTGAGCA ACATATAAAT ATATACATAC ATATCTATGT ATGCAATATC TACACTGCGA 002640
002641 ATTACTACCA TCTATTCTCA CTGCCAATGG AAACAAACTA CTCTTTTCTT TGGATTCATT GATGGATATA AAAAATTAAT 002720
002721 TTGCTATTAA CTGCTTTCAT ATTCTGTTTA GTTCTTATAG TATGGTAAAT GATACAGGTG CAGTATCAGT ATTGTAAAAT 002800
002801 TGTATGGTGA AAACTACAAA AGTCATTCTG TGGATATATT TTAAAAGGAA GAACAGAAAC TATATTTCAG ATTCTTGTGT 002880
002881 GAATATAATT ACAGAATAGG TAACTATTTT TATGTGTTTC CATAAATGAC TCCATTTCAT ATGCATTGTA ATTTAGCACA 002960
002961 AATCATAATA AATCATTTGG TAACAAAAAA AAAAAAAAAA
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Predicted Small Protein

Name NONHSAT104364_smProtein_2483:2701
Length 73
Molecular weight 8663.6449
Aromaticity 0.194444444444
Instability index 59.0680555556
Isoelectric point 6.62664794922
Runs 13
Runs residual 0.0396390916464
Runs probability 0.0636405636407
Amino acid sequence MIENATTNCPNGIAHHFGNHWFTQKATAYRWNSPEQHINIYIHIYVCNIYTANYYHLFSL
PMETNYSFLWIH
Secondary structure LLLLLLLLLLLHHHHLLLLLHHHHHHHHHHLLLLLLEEEEEEEEEEEELLLLLEEELEEL
LLLLLLEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL
LLLLLLLLLLLL
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