NONHSAT104452
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104452 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
590 nt |
Genomic location |
chr5+:147774275..147782025 |
Exon number |
4 |
Exons |
147774275..147774467,147778578..147778695,147781545..147781708,147781911..147782025 |
Genome context |
|
Sequence |
000001 AGGTACTTTG AACTCAAGTA AACAAAAGGG AAGATTTTCT CGTTGATACT GGAGACTGCA CAACAATGGG GCCACGAAAG 000080
000081 AAAAGTGTGA AAACATGTAT CATGAATAAT GAAATTCCAG AAGAAATGAC AGCAGATGAA ACAAAGGACT ATATGAATCA 000160 000161 ACTTTCACAT GAAGTACTTT GCCATATTTT TAGGATATCA TGTGTATGGA ATGTCTTTCC CGGAAGCTAA AGGAAGCAGT 000240 000241 GACCCTATAT CTGCGAGTTG TGAGAGTTGT AGATCTCTGT GCAGGGCGGT GGTGGGAATA CATGCCAAGT GGCTTTACAG 000320 000321 ATGCCAGTTT TCTAACACTA TTAAAGAAGA TGCCAGATGT TGAACAGCTA TATGGCCTTC ACCCTCGATA CCTTGAGAGG 000400 000401 CGAAGAGTAA GGGGCCATGA GGCTTTTAGC ATTCCAGGAG TCCTAGAAGC TTTGCAGGCA TGCCCAAACT TAGTGGGTGT 000480 000481 GGAAACTTCT CATTTGGAGT TGGTAGAATC CATTTGGACA TATATGCCCC ATGTTCATAT TTTGGGGAAA TTTCGTAATC 000560 000561 GTAATGGAGC TTTTCCAATT CCTCCTGAAA |
Predicted Small Protein
Name | NONHSAT104452_smProtein_65:229 |
Length | 55 |
Molecular weight | 6259.1989 |
Aromaticity | 0.0740740740741 |
Instability index | 49.4759259259 |
Isoelectric point | 6.02655029297 |
Runs | 8 |
Runs residual | 0.0145438121048 |
Runs probability | 0.0359697933227 |
Amino acid sequence | MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRISCVWNVFPGS |
Secondary structure | LLLLLLLLEEEELLLLLLLLLLHHHHHHHHHHLLHHHHEEEEEEEEEEEELLLL |
PRMN | - |
PiMo | - |