NONHSAT104739
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104739 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1855 nt |
Genomic location |
chr5+:156187491..156189345 |
Exon number |
1 |
Exons |
156187491..156189345 |
Genome context |
|
Sequence |
000001 TCTTATATAT TTTTTCAGTG CCGGGATATT CATATTCCTA AAGCCACTAT TGTGTTTTCT CTAAGAAGCA CTACATGCCA 000080
000081 CCAGAATTGT GCACTGAAAG ATAATACAAA CTGAGTGTCT TTATGAGAAT CACTGTGTCC CCTGAGGCCC AGCAGTACCT 000160 000161 GCTTCCCTGT ATGTGGAAGC AGCACCTCAT TCCCGCCATC AGCTACCTCT CATCACCCCA CCTTCATCAT CATGCTCCAG 000240 000241 GGTCACCCTG GCCAGCTCTT GTGCTGGGAC AGGGGATTAC ACCATCTCTG TTCAAAGAGG GGGAAATGTG CCTATGCCTT 000320 000321 AAGTCAATGC ACTCAGCAAG GAGAAGCACA TCTTATTTAT CTTGTTACCT ATAGTTTACT TTGGGTGATT GGAGGGGAAT 000400 000401 GACTTAGTTA TGACTGGACA TCTTAAAAGC TGATAGACAA GCCAAATGGC TGGCAGATGA TGTGGATTTC AAAGAGCCCA 000480 000481 GAATGAACTC ATCACTGGCT TAGACAGTCC TGGATGCCAT TTGGAAAGTA GTGGCCCTGC AAGCCTAAAT GAAGTAGTAT 000560 000561 TTGTAGGCCT GGGTGGCATT TGGATTTTTC TTTTCCCTCA ACAAGGTTTT ACTTTTTCTT ACTTTACAAG CAAGGGAAGT 000640 000641 TTTGTGATAG GAGAGAAATA AAAGATTTGA TATTTTTTGA GATGACACTC AAGCATCAGG CTGAGATTTG CACACATGGG 000720 000721 ATGTAAAAGC AAGCTGTGTG TTGCTTAGTC ACTTACTTAG AAGTAGATGG TGGGGGACAG CGGCGTGGGT CCTAGCCTGG 000800 000801 CCAGTGATGC TGCTGGCGTC CAGACCCCAG ACTCACTCCA AGCACTCTTG TTCAATATCT CATGCAGAAG AGTTGGGCTG 000880 000881 GTCACTCTTA GGGGTGAGAC CCCGTGATTG GTTGGTTTGT AGCACTAAGG TCTAAAAAGG AAAACCATAA AAGACATCAG 000960 000961 ATTACGCTGG ATCAGTATAA TTAATATTCC ATAGGGCCAT GTTGCCAGAA TCTGTATGTA TCAATACAGG GTTTTTCCAA 001040 001041 GCCAGGAAAC GCCCTCCTTG GCTACTAGGA GCACCTATCC CATATCATTC AGATAAACAA TGATAGCTAC AAAGTCATTT 001120 001121 GTGGCTAGAT AGGTTAAGAC AGGTGATTTT TTAAAGTAGA CTGTCTTTGC ATTTTGCCAT CTGAAGTTCA TTAATCTTTA 001200 001201 GATGACAAAA AAGCAAAAAG TTCCCAGAAC GTTTTTGCTT AGATTTTGTT CTAATCACCA CGTGAAGGAA TGAGATTAGC 001280 001281 ACCACAAGTT TCATGCCAAT AAAAGAGACT GGTGTGATCC CACATGCAAA ATTTAATCCT AAGGGTAGTG AGATCACAAA 001360 001361 CAGAATAAAA ATAAGAGCAA TCAACCATAT AAATCAAGTA CCTATTGGGA ACAGACATAA CATTCAATTT TTCATTTATG 001440 001441 CTAAGTGACC ACAGTATACA AAGTAATAAG CAGGAAATTT GATATGGGTT AAATTATGCA TTTTGTTCAG ATTTTGGAAA 001520 001521 TTGGTATGCA TTATAAGTTT CTCAATGTAC ATCTTTTTAT CCCAACACCC TCAAACTAGA ATATTTGTCA GTGGTCAAGA 001600 001601 GAAAAAATTT TACCTGAATT CTTGGGGGCC GGCGGGGAGC TTTTACATTA AAAATCTACT AACGCCTACT TTTTAAAAAA 001680 001681 TGAGATTCTT TCTAATCTTT ATATATGACA TTTTCTAGAC AATCGCACCT TTGGGTATAT TAAACAGCTG GTATCATAAC 001760 001761 AAAGAATCCA AATGAACCTT CAATATACTA GAAGTTCTAG TAGGTTAATA TTGTTCAGAA GATTTTTACA AATTAAAAAC 001840 001841 TGATTTCCAA ATATG |
Predicted Small Protein
Name | NONHSAT104739_smProtein_122:373 |
Length | 84 |
Molecular weight | 9333.8878 |
Aromaticity | 0.0843373493976 |
Instability index | 70.3554216867 |
Isoelectric point | 8.81890869141 |
Runs | 15 |
Runs residual | 0.0406961178046 |
Runs probability | 0.0339515986575 |
Amino acid sequence | MRITVSPEAQQYLLPCMWKQHLIPAISYLSSPHLHHHAPGSPWPALVLGQGITPSLFKEG EMCLCLKSMHSARRSTSYLSCYL |
Secondary structure | LEEELLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLHHHLLLLLLLHHHLLLL EEEEEELLHHHHHLLLLLEEEEL |
PRMN | - |
PiMo | - |