NONHSAT104768
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104768 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1950 nt |
Genomic location |
chr5-:156992971..156996106 |
Exon number |
2 |
Exons |
156992971..156993754,156995045..156996106 |
Genome context |
|
Sequence |
000001 AGATTGCTTT TAACAATTAA GATCTTGGGT ATTGCAACCT ATTCATACCC CCTGAGGAAT GGACCTGCTA CTTTTTATAG 000080
000081 AGGCTTCTTT GTTCTCTCCA GATGTGGATG CCGGGCATCC TCAGGAAGGG CCTGAGAACA AAGCAGAGGA CCAGATCCTG 000160 000161 TCTTTGTTCC CAACCATTGT CTGCCCAGCA TATGGGTCAT TGTATTCTGT AGGAATAGTC AGCATAGTGC CTGGCACCGT 000240 000241 AACTATTTGT TCAATGAACA AATGAATGAA TGTTGAAGAG AGAGAGACTA GAGGCTGGAT TTCACTTGGG CCTCTCATTC 000320 000321 TCATTTATAT AATTAATTCA CTCATTAAAC ATTTTTTTCT TCTCTTTTTC TCATCACTGA CTTAAAGCTC ACATTCATTA 000400 000401 AACATTAACT GAATACTTAT ACTGTATACT AAATATTATA CTAGATCTTA GGGGGAATGC AAATATAGGA CAGATTTCCA 000480 000481 ATACCCTATG GAGCTAAAGA TCTATTTAAT CTAGACTGAA GGGGAAAGAA TTTTTAACCC ATCCCTAGGA GAGGTATAAA 000560 000561 TAGTGGGTCA GCTTACTGTA CTTCATAGGA GAGGAGAGCT GATGGTGCCT CTTCTTAATA CAGAGTGGAG TTTCATCAGA 000640 000641 AAAGCTCATC AGTAGAGCCG GACAGAAAAG CTTCATAGAT CCTTAAAATG CAGTTTCATT GTTTTGCTTG AAATGCCCCA 000720 000721 TAGAAAAAGG GAACATCCTT TTTTAAATAT CAGTGCCTGA GCACCTTCCA GAATAGAGAG AATTATTTTT GGATCACCCA 000800 000801 CATAAAAATA AAGATTACTA CTCCTGGCGG GGCATGGTGG CTCACGCCCT GTAATCCCAG CACCTTGAGA GGCCGAGATG 000880 000881 GGTGGATCAC CTGAGGTCAG GAGTTCGAGA CCAGCCTGGC CAACATGGAG AAACCCTGTC TACTGAAATT ACAAAGATTA 000960 000961 GCCAGGCGCA GTGGTGCACA CCTGTAATCC CAGCTACTTG GGAGGCTGAG CATGAGAATG GCTTGAACCC TGGAGATGGA 001040 001041 GTTTGCAGTG AGCCAAGATT GGGCCACTGC ACTCCAGCCT GCACAACAAA GCAAGACCCC GTCTCAAAAA AAGTTGTCAG 001120 001121 TTCCTTAGTC CCAAAATAGA GAGCTTATGC TTAAAACACT CCAAAGAATC TGTTCTGTTT TAAATATGTA AATATCCTTT 001200 001201 TTTAAAAAAA TAATTTATTT CTTCGAAAAA AGTTCAGTAG CCTTAAGTTG AATTGTTGAA ACGTGGAGAT TTATTATGAC 001280 001281 TTGGTTTTTA AATTTCTTTG AAATTCTCCA CAATAATAAA GTAAAAAGAG ATTAATAAAA AGTTCTTTTC TTAAACTGTG 001360 001361 AAAGCAATTG TAGACATGTG GAAAGATGTG CAAAAGAAAA CAAAATTAAC TCATGATCCC ATTAACTATG GTAATGGTTA 001440 001441 GGCTTATTTC TCTCTACATT TTTCCCTTTG CGAAGTGTAT TTAAATAAAA TATTCAGTAT TGTATTTTGA GCTTTATGAC 001520 001521 TAATGATTAT TGTGTACATT TTGTCAGTAA TTTAACAACT ACTTAAAGTT GCTGCTTTTA ATGATCATTC AGTGTTCTGT 001600 001601 CATATGAATG GATCATCATT TATTTAACCA TTCTCTAACA GGTTATATTT AGGACAGTTA GGTTACATTT CATTATTCAT 001680 001681 TACTTTTTTT TTTTTTTGAG ACAGAGTCTC GCTCTGTCGC TCAGGCTGGA GTGCAGTGGC ATGCTCTCGG CTCACTGCAA 001760 001761 CCTCCGCCTC CCAGGTTCAA GCGATTCTCC TGCCTCAGCC TCCTGAATAG CTAGAACTAT AGGTGTGCAC CACCACGCCC 001840 001841 AGCACTTTGG GAGGCTGAGG CAGGAGGATC ATTTGAGGCC AGGAATTTAA GACCAGCCTG GGGCACCATA CTGAGATCCT 001920 001921 ATCTCTACAA AAAAAAAAAA AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT104768_smProtein_101:211 |
Length | 37 |
Molecular weight | 4139.0006 |
Aromaticity | 0.0277777777778 |
Instability index | 89.0666666667 |
Isoelectric point | 10.8715209961 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0381558028617 |
Amino acid sequence | MWMPGILRKGLRTKQRTRSCLCSQPLSAQHMGHCIL |
Secondary structure | LLLLHHHHLLLLLLLLLLLEELLLLLLHHHLLLLLL |
PRMN | - |
PiMo | - |