NONHSAT104850
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104850 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
814 nt |
Genomic location |
chr5+:159863880..159864693 |
Exon number |
1 |
Exons |
159863880..159864693 |
Genome context |
|
Sequence |
000001 cttccccttc cttcatgatt gtaaatttcc tgaggtctcc ccagccctgc agaactgtga gtcaattaaa cctctttcgt 000080
000081 ttatacatta accagttttg ggtatttctc catagcagtg tgagaacaga ctaatacaAA TAGTTTATGC TCCTTGGTCT 000160 000161 TTATATAGAG GCATCTAGGA TTAAAGCAGA GACCCTCTTT ATTGCTTGAA GGATTCTGTT TTGGGACTCA TCATTGCCCT 000240 000241 GATGGCTGGC TGCATCCGGA ACACAGAGGA AGAAAGAGTT GCCTTCAAGG ACATGCCATT TCCAGGAAAA GAGCAAGAAT 000320 000321 GTAAAAAATA AAGAGGTTGA AATGAGTTTA TGAAGTTACT AAGAACATTA CAAGTGGAAT GAACTCCCTG GAGATGTGAC 000400 000401 TCTCAGGAGG GCAGAGCCCT TTGTTCACTT GCCCTATGGA CAGCATATTG TACATcagtg cttccaaaag ggtgcctaga 000480 000481 cataccaggg gtccccaaga ccttttaggg gtacatgaca tcaaatatat tttaataata gtgccaggat gttatttgcc 000560 000561 ttttaaattt ccattctttc acaagtgtac agtggagttt tccagaagct actccaagta tggtattata gcagagcaaa 000640 000641 tgaagaagta gatgtgagaa atcagctgtc ttaagccaga tagtagagat tttcagaaat gtaaaacaat gtcatgttaa 000720 000721 ttttctaaat gtgggtgttt tttggtttag gaaaatagtt actttttata aaaatatatt aattatgtta taattaattg 000800 000801 ctttattgtg ataa |
Predicted Small Protein
Name | NONHSAT104850_smProtein_14:133 |
Length | 40 |
Molecular weight | 4727.472 |
Aromaticity | 0.153846153846 |
Instability index | 42.9615384615 |
Isoelectric point | 10.6939086914 |
Runs | 8 |
Runs residual | 0.0363876319759 |
Runs probability | 0.0346559795089 |
Amino acid sequence | MIVNFLRSPQPCRTVSQLNLFRLYINQFWVFLHSSVRTD |
Secondary structure | LEEEELLLLLLLLLHHHHHHHHHHHHHEEEHHHHEEELL |
PRMN | - |
PiMo | - |