NONHSAT104857
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104857 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
746 nt |
Genomic location |
chr5-:159921046..159921791 |
Exon number |
1 |
Exons |
159921046..159921791 |
Genome context |
|
Sequence |
000001 gataagagct atctttgcaa agtttgttta tgcaggtcca tttcggtgca gccttccatc tccttcaagg ccataaaact 000080
000081 tccccaggaa aagggattta cggcagtctt catttctcag aagtttctgc ttttagtcag ataagggatg cttagggaaa 000160 000161 ccttctttct gcatctgttg aatctcaaat gccttcagct caaaataatc cttctgctac agaacatatt ttgaggtggt 000240 000241 atattctgat tcccCACTCT CCCTCGTCCC CTAGCATGGT CTTCTTGACT TTGACTTGCG CCCtgtgctg ggtgttcagt 000320 000321 ttgtctcctg ggccattctc cactcttctc tgccctactt tgtgctccca gaggctgacc tgtaggaagg catcaaaggt 000400 000401 tcattgccct ctgacttcca attgggtttg gcactggcag gaaaagaaag ggaaggagta gagacaactt ggagcacgag 000480 000481 cttggggtat ttattctcca agttccctcc ctgtggagtc cccaagtgtt ggctgcattt cattgcaaaa gatgttagct 000560 000561 caaataaggc agtcctcccc acagttctgt ctccccagtt tcagtaaccc accccctcat ctgcccctaa aggcttagga 000640 000641 gtggtaatgg agccctacta ttactaatct agggttctgc actatgcctt gcagtttccc tacactctgc ccacgccttt 000720 000721 gtaaatagtt tctttatgaa actctg |
Predicted Small Protein
Name | NONHSAT104857_smProtein_188:460 |
Length | 91 |
Molecular weight | 10212.8583 |
Aromaticity | 0.1 |
Instability index | 68.22 |
Isoelectric point | 9.09844970703 |
Runs | 12 |
Runs residual | 0.00652557319224 |
Runs probability | 0.0598245304127 |
Amino acid sequence | MPSAQNNPSATEHILRWYILIPHSPSSPSMVFLTLTCALCWVFSLSPGPFSTLLCPTLCS QRLTCRKASKVHCPLTSNWVWHWQEKKGKE |
Secondary structure | LLLLLLLLHHHHHHHHHEEEELLLLLLHHHHHHHHHHHHEEEEEELLLLLLLLLLLLLLL LLLLLLLLLLEELLLLLLLEEHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiiiiii |