NONHSAT105037
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105037 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1016 nt |
Genomic location |
chr5-:169620921..169626134 |
Exon number |
4 |
Exons |
169620921..169621010,169623488..169623635,169624756..169624833,169625435..169626134 |
Genome context |
|
Sequence |
000001 AAACAATGCA TTTTATCATA GGGCCGGACA GCTATATGCA CAAGATGCTA CCTGCAGAGA TTGGTTTTTG CCCAGATGTG 000080
000081 CAGGAGAGAT GCACAGAGAG GAAGAAATGC ATACATGTGT GCAGGTTTTG GCGTGTGCAC AAGAAGCCTG GAAGGATTTT 000160 000161 CTTTGGATCT ACAGTCAAAA TGGATTTCCG AGAGGAAGCT GTCTGAAAAC ACACCTCTTC CCTGTGCTAC ATACGGTCCC 000240 000241 ATCTCTGCCA GCCAGGTTGT CAGGAAAGTG ATCAGCACTG GCTTCAACTC TGGCTAGAGC TCTTTGGCCA ATGTGATGGG 000320 000321 CAGAAAACTG GAATGAGGAC AGAAAAGCAC CTCAGAGGTT TGAAGAGTCT AGTCTCTCAC CACCTTGCTG TAGGTTTTCT 000400 000401 GAATACTTCT GAGTTTAGGA GCATTTTTTC TCAACAGGCA AGTCAGGAGC TGCTAAGATA AACCATGGCA GTAAGCTCGA 000480 000481 GCCAGTGTTC GTATTTGCCA TTGATCGGCC ACCAagtgct tgctatgtgc catgcattgt gctaagcact atctcattta 000560 000561 atatttacag caatcttatg aggtagatgc tactgttatc tccattttac agatggggaa actgaggcac agagttccac 000640 000641 agctggtaac ttgaggaata ggaattcaac cactggagag tctggctGGA GTTTTTTGTG GCTGAGACTT ATTTGAATGC 000720 000721 CTGTTTCATA TGGAGCTTTT AAGTGTAACA GTTGTGAGTG AAATTGCCCC TTTTCAAGCG CTCCGAGTTT GCTTCTGCAT 000800 000801 GGAAGGGGAA GATGGACTAG AGCTGATACC TCCTGCACCC TGGTGAAGAA ATGCACCCTG AGGCCAGAAA ATAGTACAAA 000880 000881 CCCATCTGGC TGCAACAGTC CAGCAGCATG AAGATCAAAG TCACGTAGTA GAGCCAGAGA GAAATTTGCC CTGGGCCTAA 000960 000961 TATTCATGAA GCCTTTCCAA TTCAGACTCG GTATTATTGC CAAGTCGGTG TGTTTG |
Predicted Small Protein
Name | NONHSAT105037_smProtein_5:205 |
Length | 67 |
Molecular weight | 7871.2482 |
Aromaticity | 0.121212121212 |
Instability index | 76.5166666667 |
Isoelectric point | 9.09783935547 |
Runs | 13 |
Runs residual | 0.0463618218109 |
Runs probability | 0.0342491813081 |
Amino acid sequence | MHFIIGPDSYMHKMLPAEIGFCPDVQERCTERKKCIHVCRFWRVHKKPGRIFFGSTVKMD FREEAV |
Secondary structure | LEEEELLLLLLLLLLLLLLLLLLLHHHHHLLLLLEEEEEEEEEEELLLLEEEELLEEEEL EEEELL |
PRMN | - |
PiMo | - |