NONHSAT105070
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105070 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
983 nt |
Genomic location |
chr5+:170507601..170508562 |
Exon number |
1 |
Exons |
170507601..170508562 |
Genome context |
|
Sequence |
000001 GAATTCCCAG GTCAGACAAA ATGATGGGAA ATAAGTAAAC ATCCTTTTAA ATCTTCACCA GAAATCAATA GGGTTTAAAG 000080
000081 ATGATGGACG TTGGTGTTTT TTCCTGCTTA AGGACTTCAA CCTTTTACGG GAAAATATCT TCTCTACTTG TCAGCAGTTT 000160 000161 TTTCCATGCA CACAATGAAT CGCTGCTGCA AATAGAACAT TCTGCATAGA ACATTCTTCA TCATTATTAT AAGAAAGAAG 000240 000241 CTGTGTAAGA CTGGCCTTGG TAATGTAGAG CCTTTTGGGG CATTTTTGTA TGAAAGAGAG GACCATATCT TACAATTTTG 000320 000321 TTTTCATCAT AAGTGTAATT TATGTGCCAA CTTTTCCTCA ACTAAATAAT AACAGTTTTT ATATACTGAG AACCTCCTTT 000400 000401 GTACTGGGCA TTGACTGTGT GATGTTTTAA GGTAGATTAT TTGACCCCAC TTTATAGATG ACAAAATTGG AGCCCAGAGG 000480 000481 CTCTAAGTTC GTCTGACTAG TGATAGAACT GATACTTAAA ACCCTAGTCC ATCTGAGTTT AAAGCTTATC CTTTTACTAC 000560 000561 TTTCCAGCTG TGTCTCTGAG GACAGGCACT CAATAGGTGT TCTTGCCCTT GGTTCTATTT CTTCGGTAGT GGTATCTCTT 000640 000641 ATTTTCTTTC TCCTTTCCCC CTAGTCCAGT AAAACTAATA TAAGTGATGG CCTTCACATC ATTTAATAAG AGGATAAGAG 000720 000721 CTACATCATG GTTCATTGGA ATAAAAGAAT ATGGGTTAAG AACTGGCTTT CCCAGTATAC TCTGCAGATT TGATTTATTA 000800 000801 TGAATGATTT ATGAGATATT AGATTGCTGT ATAGTAGTTA GCAGTGTATT CACAATCAGC TGCACTCTAA TGCCAAGTGT 000880 000881 TGAAATATTA ACTGAACGTA TCATGTAGTG TCCTTTGTTT ATAACATAAT AATCTTGACT TTACAAAATA GTTAACTTTC 000960 000961 CAGCTGTTTA ATTTGTGGAA TTC |
Predicted Small Protein
Name | NONHSAT105070_smProtein_80:208 |
Length | 43 |
Molecular weight | 4691.3225 |
Aromaticity | 0.119047619048 |
Instability index | 62.4264285714 |
Isoelectric point | 6.21685791016 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0451459863226 |
Amino acid sequence | MMDVGVFSCLRTSTFYGKISSLLVSSFFHAHNESLLQIEHSA |
Secondary structure | LLLEEEEELLLLLHHHHHHHHHHHHHHHHHLLLLHHHHHHLL |
PRMN | - |
PiMo | - |