NONHSAT105168
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105168 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
417 nt |
Genomic location |
chr5-:172634182..172635216 |
Exon number |
2 |
Exons |
172634182..172634288,172634907..172635216 |
Genome context |
|
Sequence |
000001 AAGTCATGGG AGGAAGCTGA GATTTTCTTT CAAGGGGAAT GAAAAGCCAA CGACACAAAT GCTGCCTTTG ATGGCCTTTG 000080
000081 CCCAAGTGTC TCCATAGCAG ATGTGGTGGT CAGGAAAACA GTTCATACTG TATTTGTTCT TCTGTGGGGC GGAGGCACAT 000160 000161 GACATGATTC ACTTTCCcac tgtggctgat taccagcttg cctgattctg atgagacaga acacacacac acataTGCAC 000240 000241 ACACGCGTAT GCATGttttt tgtttttgtt tttgtttgag atggagtctt gctctgtcac ccaggctgag tgcagtggca 000320 000321 caatcacagc tcattgcagc cttgacatcc cgggctcggg tgatcctccc aactcagcct ctccagtaac tacaggcata 000400 000401 tgccaccacg cctggct |
Predicted Small Protein
Name | NONHSAT105168_smProtein_248:388 |
Length | 47 |
Molecular weight | 5145.1465 |
Aromaticity | 0.0869565217391 |
Instability index | 86.9086956522 |
Isoelectric point | 10.436340332 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0347553435789 |
Amino acid sequence | MHVFCFCFCLRWSLALSPRLSAVAQSQLIAALTSRARVILPTQPLQ |
Secondary structure | LLEEEHHHHHHHHHHLLLLHHHHHHHHHHHHHHLLLEEELLLLLLL |
PRMN | LLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | ooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii |