NONHSAT105178

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT105178

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1191 nt

Genomic location

chr5+:172761034..172762224

Exon number

1

Exons

172761034..172762224

Genome context

Sequence
000001 aaaaaaacac caataagaaa tgggagaatc atggaatcac ctagaaggat gatgcaagaa tgaaacaaat tatcactgtt 000080
000081 gtatcatcct tcaggttttt gatcacattg cctgaagtat tacatcattt ctcgagaaag tataaaagaa gacagaggat 000160
000161 accatttttg tagtcttctt cttcttactt ttatcaaata tagttgtaaa ttcagctata tttttcattt ttctgcacaa 000240
000241 actgtaaaga gaagaaaagt gacagaggaa aatgttgtac agttattagt caaatcagaa gatgaatgca gagagacagc 000320
000321 actatggaag actcgataat ggcgaaactg actgaagtgt ataagcaaag tctcagacta tgagtcctac atgataataa 000400
000401 cctagattaa tttcctcaga tttaaggatt catgagtaaa caatatattt ctaaggataa caaaaaatat gatattctca 000480
000481 tcctgttagt cattcaacag gaatgatttc atcacactat attttgccgc aaaaacttgg agcatcctgt tttgctaaaa 000560
000561 gaatgggggc caattttttt tttttttact ttttatgttt gtttattgaa attttcttga tacagtttga aggggacaaa 000640
000641 tgatgaagtc agatcaaagg tgagtacaaa gatgattgaa aagaaatagg tggtatggaa aggaaagaaa aaaatcactg 000720
000721 gactaaacat tctaattggt gtttataaat ttaaaaataa aaatgctttt caattacaga gaaaagaaga tgaccatctt 000800
000801 ctcctgaaca aaattatgaa ctgtcagagg tttcaaaggt aataagtttt atgatgcaag tggaagaaga accagaagta 000880
000881 atgatgagct agaacttatc agagatttcc ttgaaatcag gacttggtgt ttataagatg ggtctgtccc aggcttatgc 000960
000961 atgacagctg gtgagcagtt agttgcatgc agaggacatt gctcattttg ggcctatcta cactcaaaac caggaaaata 001040
001041 tgctgtgaaa atttgctatt actaacgtct ctaataaagt tttaaaaaac gatcctttta gtcttacttc tgtagattta 001120
001121 ttcataaaca tagaaaggat ccattggacc ctgatggtaa aagatgatga tgacattttc ctgctacacc g
[back to top]

Predicted Small Protein

Name NONHSAT105178_smProtein_59:172
Length 38
Molecular weight 4586.5
Aromaticity 0.135135135135
Instability index 67.5540540541
Isoelectric point 11.8442993164
Runs 7
Runs residual 0.009422266303
Runs probability 0.0360612713555
Amino acid sequence MKQIITVVSSFRFLITLPEVLHHFSRKYKRRQRIPFL
Secondary structure LLEEEEEELLLLLEEELHHHHHHHHHHHHHHLLLLLL
PRMN -
PiMo -