NONHSAT105231
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105231 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
541 nt |
Genomic location |
chr5-:173508525..173513634 |
Exon number |
3 |
Exons |
173508525..173508622,173509422..173509630,173513401..173513634 |
Genome context |
|
Sequence |
000001 CTAGATCTCA CCGACCTGTT GAGAGGAAAG GAGCCAACCT GGCCTGGTGA CCTTCTCTGT GCAAGcaggg agcaggcaca 000080
000081 caccaccaat gagtgaagaa ggctgctgtg gcatgctcgg gacctagagg gaacctgcct cattgacagg ggacagcagc 000160 000161 tgcacagctc cagacaatcg ttgtcaagga cgggaatgag attctaacat ggctgatctg atttttcaag aaaggtgaaa 000240 000241 gacccaaatt catggaagag aagtgagtca cacagggagc cagtggcaga gccaCACCCC ACAGAGCAAT CAACATGCTC 000320 000321 TACTCTGCAG ACCTGCAACA GGGAGGGAAG CCAGACTCTG ATGCAAGAAG GAAAGACCAT GTGCTGGCTC AGTGTGTGCA 000400 000401 GCCTGGACTG AGCTACTGAA CTCTAAATCC AAGGATGACT AATaggcaga atgacattaa taccagacct gatgaagaca 000480 000481 gcacaaaaag taaatctcaa cacaacctca caatattaat aaagcaaaaa ttttaaatac a |
Predicted Small Protein
Name | NONHSAT105231_smProtein_314:418 |
Length | 35 |
Molecular weight | 3748.1646 |
Aromaticity | 0.0588235294118 |
Instability index | 42.9 |
Isoelectric point | 6.50286865234 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0283695460166 |
Amino acid sequence | MLYSADLQQGGKPDSDARRKDHVLAQCVQPGLSY |
Secondary structure | LLEELLLLLLLLLLHHHHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |