NONHSAT105339

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT105339

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

928 nt

Genomic location

chr5+:175735016..175736018

Exon number

2

Exons

175735016..175735614,175735690..175736018

Genome context

Sequence
000001 gaacaaaatg aaatactatt tagtaattaa aagcaatgaG CTGGGCCAAG ATGGCAGTGC AGGTGGTGCA GGCGGTGCAG 000080
000081 GCAGTTCATC TAGAGTCTGA CACTTTCCTT GTTTGTCTCA ACCATGCTCT GAGCACAGAG AAGGAGGAAG TGATGGGGCT 000160
000161 GTGGATAGGG GAGTTGAACA ATGATACAAG GAGTGACTCC AAATTTGCAT ATACTGGAAC TGAAATGCGC ACAGTTGCTG 000240
000241 AAAAGGTTGA TGCCATCAGA ATTGTTCACA TTCGTTCTGT CATCATCTTA ACGACGTTCT GATAAGAGGA AGGACCAAGT 000320
000321 AGAAATTTCA CCAGGGCAGC TGTCTGCAGC TTCAACAGAG GCAGAGAAGT TGGCTGAACT GACAGGCCAC CCCATGAGAG 000400
000401 TTGTGGGCTG GTATCATTCC CATCCTCATA TAACTGTTTG GCCTTCACAT GTTGATGTTC GCACCCAAGC CATGTACCAG 000480
000481 ATGATGGATC AAGGCTTTGT AGGACTTATT TTTTCCTGTT TCATAGAAGA TAAGAACACA AGGGCTGGCC GGGTACTCTA 000560
000561 CACTTGCTTC CAATCCATAC AGGCCCAAAA GAGTTCAGAg TATGAGAGAA TCGAAATCCC AATCCATATT GTACCTCATG 000640
000641 TCACTATCGG GAAAGCGTGC CTTGAATCAG CAGTAGAGCT GCCCAAGATC CTGTGCCAGG AGGAGCAGGA TGCATATTGG 000720
000721 AGGATCCACA GCCTTACACA TCTGGACTCA TAACCAAGAT CCATAATGGC TCAGTGTTTA CCAAGAATCT GTGCAGTCAG 000800
000801 ATGTCAGCAG TCAGCGGGCC TCTTCTACAG TGGTTGGAGG ACAGACTGGA GCAAAACCAA TAGCATTTGC AGGAATTGCA 000880
000881 ACAAGAAAAG GAAGAGCTTA TGCAAGAACT TTCTTCTCTG GAATAAAG
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Predicted Small Protein

Name NONHSAT105339_smProtein_35:301
Length 89
Molecular weight 9895.3114
Aromaticity 0.0681818181818
Instability index 43.0715909091
Isoelectric point 5.48065185547
Runs 15
Runs residual 0.0390909090909
Runs probability 0.0418595065654
Amino acid sequence MSWAKMAVQVVQAVQAVHLESDTFLVCLNHALSTEKEEVMGLWIGELNNDTRSDSKFAYT
GTEMRTVAEKVDAIRIVHIRSVIILTTF
Secondary structure LLHHHHHHHHHHHHHHHHHHLLLEEEEELLLLLLLHHHHHHHEEEELLLLLLLLLLEEEL
LLEEHHHHHHLLLEEEEEEEEEEEEEEL
PRMN -
PiMo -