NONHSAT105428
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105428 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
997 nt |
Genomic location |
chr5-:176935785..176937383 |
Exon number |
2 |
Exons |
176935785..176936658,176937261..176937383 |
Genome context |
|
Sequence |
000001 ATGTGGACTG GATGCCCAGC GTGAGTGTAT ACCGTGAGGG CCTTTGAGCT CTCGGACAGC GTGGAGTGGT CAAGGGAGGC 000080
000081 CTCCAGGAGG AAGAGGTGGC CAACCGCCCC AGGCAGCACA GTGCTGTCTC TAGACGGAGG GACGGGAAGT GGCCAGAAGG 000160 000161 GGAAGTGTGA GGAGTTCCCG TCCAGCCTGT CATCAGTCTC CCCAGGTCTT GAAGCGGCGG CCCTGCTCCT GGCCGTGACC 000240 000241 ATGGACCCTC TGGAGACCCC TATCAAGGAT GGCATCCTCT ACCAGCAGCA TGTCAAGTTT GGCAAGGTGG GGACCCCTGG 000320 000321 CTGCCAGGCA GCTGCCAAGG ACCAACAGTG GGTGGAGAAT GCAGCCTCTG CCCCTGCCTC GGACAGCCCA GGCAGACCTG 000400 000401 GGAGACTTGG GAAGGGAGTC AGGGTGGAGG ATCCCACCCA GGTATGGGGA GTGGAATGGA GTGCGGGTGT CAGCCTGAGA 000480 000481 CGGCAGGGGC TGAGCAGGCT CTGCCAGACC CTGCCTCCGG GAGAGATGGG AAATACAGGA GTGGGAGAGG GTCGAAGGCT 000560 000561 CAAACCTCCC AGCAGGGAAG AGCTTCACAG CCTCTGACCC ATGAAATAGT GCCACCGAGG GCCCTAAATA GGGTGAGGGG 000640 000641 CTGAGCTGGA GGAGGCCTCA AGGGTGGAGC CCCTCCCTGC AGCGGCACTG TCCTGGGAGC AAGGAGGCAG GGGGTCACCT 000720 000721 CTCCTCGGCA GCAGCCCCAC ACCCCCGCAG CTCAGCTGCA GCTGCTGCCC AGGCAGATAA ACCGTCAGTT TCCTTTGCTC 000800 000801 GAAGCTATTT GCATGTTTCC TTCCTTAACA GCTTGAGGCA GAGGCCTCCC TCCCACCCCA GCTCTTGGCC TGTGGCCCAA 000880 000881 GTGCCCCTTT TTGGGGGTGA GAGGGAACCA ATATAATGGC AGTGTCTGGT GGTCTGCCCG GCCACTGGAT GCTTTACAAA 000960 000961 CATGACCCAG TAGCAGTCCC AGCTCGAGTT CTCATGG |
Predicted Small Protein
Name | NONHSAT105428_smProtein_443:643 |
Length | 67 |
Molecular weight | 6893.5761 |
Aromaticity | 0.0151515151515 |
Instability index | 45.4757575758 |
Isoelectric point | 9.37799072266 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0250082014789 |
Amino acid sequence | MGSGMECGCQPETAGAEQALPDPASGRDGKYRSGRGSKAQTSQQGRASQPLTHEIVPPRA LNRVRG |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLEEEEELHHH LLLLLL |
PRMN | - |
PiMo | - |