NONHSAT105455

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT105455

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1371 nt

Genomic location

chr5-:177139121..177143367

Exon number

4

Exons

177139121..177140171,177140749..177140917,177141050..177141178,177143346..177143367

Genome context

Sequence
000001 TGAAGATTGG AATTCTTCAT ATGTAAAAAG AGAAGAGAAA GACATTCTTG ATTTTGGTGA CTAGAGTTGT AGATGCTGGA 000080
000081 AGCTTTGCCA CTAACATTGA TGAACCAGAT GCATGTCACC AGCCCATCAC GGTGATTCTT AATGCCGTTA AGGCACCATG 000160
000161 GGCCGGCACT GCCACGTTTT CCAAGGAACC TGCCAGAGCT CCTGCGGAAG CTGCTCCTCG GGCGATGGAG TCCCTTTGCT 000240
000241 GCTAGGCCCT TCTTCAGTCA CCACAGGATG CCTGCCATTC ATGAACAGGA AGGAGAGGAC GGGCTTTGAA TAAAAAACAG 000320
000321 GATCCAGGAA ATATTTGTGA GGCCATTTGG ACTTCAGTGT GAAATGGTGT TAAAAGATGA AGTCATTTAT TCAAGAAGTA 000400
000401 AACCTCTGCC ACCTGGACTG TGCTCAGACA TTTCATTGAT TTTGTTTAAT AAACATTTTC TGGCTTTGGG AGGTGTCTCT 000480
000481 CTTGGTAGAG CACAGTGTCA AAGATGGACA AGATGGACAC ATAGTCCATT ATTTGGTATT GTTTGTGTAT GGGAGCGGAC 000560
000561 CACAAATTAA TGTTTGGAGA ACAATTTTGT CATAACACAC TGTTGAGGCT CAGTTGTACA GAACTGGAAA AGTCTTTCAG 000640
000641 CTTGGCACAT GTCCTGATTC AGCCTTTGTT TAACATACAT TCCAATCCGG ATTCTATCTT CACTGGCTAC AAAGACCACC 000720
000721 TGATACGTGC ACCACGACAC AGGAGCTGCT GGAGAGGGGG TAGTGTTATC ACCTCAAACC CACAGCCATA Tttttcaaaa 000800
000801 gccagcttag agagaggtgt actgatagct gcatagagaa catgcagtcc atccattctt cCCAGTGATG TACATTTCTC 000880
000881 AATCAGTAAC CACGTGGTAT ACCAGCCTTG AGTGTCACAT CTCCCAACCA TACCAAATGG ATCACCTAAC TGGAGGTGGG 000960
000961 GGGGGCCCCT CAGAAATGAG ATTTCGTATT TACTGTAAAA TTGCCTTAtt ttttcttttg aggtggagtc tcactctgtt 001040
001041 gcctgggctg gagtgcaatg gtgtgatcac tgctcactgc aacctccgcc tcctgggttc aagcagttct cctgcctcag 001120
001121 cctcccaagt agctgcaatt acaggcgcat gccaccactc ccagcaaatt tttatatttt tagtggagac agggtttcac 001200
001201 catgttggcc aggctggtct caaactcctg acctcaggtg atctgcccac cttggcctcc caaagttctg ggattaaagg 001280
001281 tacgagccac cgcaactggc Tgagaatctt tttatttgct gatttgtctc ttgtgtattt tctttgttca gatgtctctt 001360
001361 cagatctttt t
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Predicted Small Protein

Name NONHSAT105455_smProtein_548:835
Length 96
Molecular weight 10711.2025
Aromaticity 0.0947368421053
Instability index 49.3694736842
Isoelectric point 8.98773193359
Runs 17
Runs residual 0.0498963945296
Runs probability 0.0373920633437
Amino acid sequence MGADHKLMFGEQFCHNTLLRLSCTELEKSFSLAHVLIQPLFNIHSNPDSIFTGYKDHLIR
APRHRSCWRGGSVITSNPQPYFSKASLERGVLIAA
Secondary structure LLLLLLEELLHHHHHHHHHHHLLHHHHHLLLHHHHHHHHHHHLLLLLLLLLLLLLHHHHL
LLLLLLLLLLLEEEELLLLLLLLLLHHHLLLEEEL
PRMN -
PiMo -