NONHSAT105543
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105543 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
735 nt |
Genomic location |
chr5-:178048810..178050340 |
Exon number |
2 |
Exons |
178048810..178049460,178050257..178050340 |
Genome context |
|
Sequence |
000001 TCACAAGCGG AAGAGGAGAT CTCATAGTAG CACACAAGAG AACAGGCATT GTAAACCACA TCACCAGTTT AAAGAATCTG 000080
000081 ATTGATGTTC CATTGGGACT GTTTACCAGA TTGCTTTCTA AATTAGCCAG CTGGGGTTAC TTTAAAAAAC AGTATGTAAT 000160 000161 TTCTTTCCTT CTCCACGTTA ACAGACTTGT TCTGCCAAAC AGCTTATTTG TAGTCAGTGC AGACAAATCA TGCTTCATAC 000240 000241 GCATTGTTAT ATAAGGGGAA GGGGGAAGGT TTATGACAGG ATTTCAGAGA CCAGAGATAA TTAATAATTA ATGTACAGTA 000320 000321 CACTAAAAAA AACCATCTGT ACCCCACTAT TAATAAATAC AAAAAACCCT AAGGCTTAAC GTCATAGTAC TGGTTATTCA 000400 000401 TAGGATAATT ATACGTTGTA TATATAGAAA GGAAGTGATA TGAGTGATGA ACAGTTCATT TGTGCTCATA GTTAACTACG 000480 000481 TAAACATGAT ACTGAGTCCA GTTAACCACC AGGCCAGTGC CTGCTTTGAT ATTTGTACCA GATGTGTTTG GTGGTCAGCG 000560 000561 TTTACCATGA TCCAGAATAT TCTAATTTTT GAAGGTCAAA AACTTTGAGT GTTTTTATAA AATAACAAAA AACTGAAAAA 000640 000641 TGCAGAAAAG TATAAAGATG GTAATCTCTG TAGGAAATTA GTCCCCATTA TTTAGCTGTA AAattataat taaaaaaaaa 000720 000721 atctttgttt ctaaa |
Predicted Small Protein
Name | NONHSAT105543_smProtein_446:607 |
Length | 54 |
Molecular weight | 6098.145 |
Aromaticity | 0.132075471698 |
Instability index | 53.0716981132 |
Isoelectric point | 6.49444580078 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0687031569384 |
Amino acid sequence | MNSSFVLIVNYVNMILSPVNHQASACFDICTRCVWWSAFTMIQNILIFEGQKL |
Secondary structure | LLLEEEEEEEHHHHEELLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | TTTTTTTTTTTTTTTTTTTTTooooooooTTTTTTTTTTTTTTTTTTiiiiii |